DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RHOBTB2 and Cdc42

DIOPT Version :10

Sequence 1:NP_001153508.1 Gene:RHOBTB2 / 23221 HGNCID:18756 Length:749 Species:Homo sapiens
Sequence 2:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster


Alignment Length:202 Identity:79/202 - (39%)
Similarity:117/202 - (57%) Gaps:30/202 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    34 VETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDV 98
            ::|||||||||.|||||.|:.:...|...::|      ||||:  |.|.|..        ::...
  Fly     1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEY------VPTVF--DNYAVTV--------MIGGE 49

Human    99 SVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVG 161
            ..:|.|:||.|  |:.:.|..:|.::||.::|||:.:|:|..:||..|.|||.|.|.:.|.:|||
  Fly    50 PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 114

Human   162 CQLDLR--YADLEAVNRARRPLARPIKPNEILPPEKGREVAKEL-GIPYYETSVVAQFGIKDVFD 223
            .|:|||  .:.||.:.:.::      ||   :..|:|.::|||| .:.|.|.|.:.|.|:|:|||
  Fly   115 TQIDLRDENSTLEKLAKNKQ------KP---ITMEQGEKLAKELKAVKYVECSALTQKGLKNVFD 170

Human   224 NAIRAAL 230
            .||.|||
  Fly   171 EAILAAL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOBTB2NP_001153508.1 RhoBTB 35..229 CDD:133275 76/198 (38%)
BTB1_POZ_RHOBTB2 272..497 CDD:349665
BTB2_POZ_RHOBTB2 502..625 CDD:349668
BACK_RHOBTB2 630..726 CDD:350606
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 77/198 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.