DRSC/TRiP Functional Genomics Resources

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Protein Alignment JMJD6 and PSR

DIOPT Version :9

Sequence 1:NP_001074930.1 Gene:JMJD6 / 23210 HGNCID:19355 Length:414 Species:Homo sapiens
Sequence 2:NP_001262832.1 Gene:PSR / 42616 FlyBaseID:FBgn0038948 Length:441 Species:Drosophila melanogaster


Alignment Length:412 Identity:273/412 - (66%)
Similarity:316/412 - (76%) Gaps:18/412 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     4 KSKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPA-AVADNVERADALQLSVEEFVERYERPY 67
            :|:||.||.||.|||||.....|:...|.|.|  .|. ...||:||.:..|:...||:||:||||
  Fly    10 RSRKRTREVKRKARPELDGENAWSAMRYCEKF--EPFWDFTDNLERIEESQVPESEFIERFERPY 72

Human    68 KPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTRDDSPLYI 132
            ||||:....:||.|.|||||.||.:|||||||||||||:|||||||||||:|||:||||||||||
  Fly    73 KPVVIRGCTDGWLALEKWTLARLAKKYRNQKFKCGEDNEGYSVKMKMKYYVEYMQSTRDDSPLYI 137

Human   133 FDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWN 197
            ||||:|||.:|||||:||.|||:|.||||||.||.||||||||||||.|||||||||||||||||
  Fly   138 FDSSFGEHHRRRKLLDDYVVPKYFRDDLFQYCGENRRPPYRWFVMGPARSGTGIHIDPLGTSAWN 202

Human   198 ALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPG 262
            .|::||||||||||.||:||:|||...||.|:|||||||:.||||||||:||.:::|:|:||..|
  Fly   203 TLIRGHKRWCLFPTQTPKELLKVTSAMGGKQRDEAITWFSTIYPRTQLPSWPEQYRPIEVLQGAG 267

Human   263 ETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVRGRPKLSRKWYRILKQEHPELAVLA 327
            |||||||||||||||:|.||||||||:|.||||.||||||||||||||||.|:|:.:.||||.:|
  Fly   268 ETVFVPGGWWHVVLNMDDTIAITQNFSSQTNFPCVWHKTVRGRPKLSRKWLRVLRDQRPELAQIA 332

Human   328 DSVDLQESTGIASDSSSDSSSSSSSSSSDSDSECESGSEGDG---------TVHRRKKRRTCSMV 383
            ||::|.||||.||||||:||||||||||.|:.| ||...||.         |..::||||   |.
  Fly   333 DSINLNESTGFASDSSSNSSSSSSSSSSSSEEE-ESDDGGDSNTDSGQESLTAKKKKKRR---MA 393

Human   384 GNGDTTSQDDCVSKERSSSRIR 405
            |.|  :.........||.||.|
  Fly   394 GGG--SGSGSMGGSSRSXSRER 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JMJD6NP_001074930.1 Nuclear localization signal 1. /evidence=ECO:0000269|PubMed:14729065 6..10 2/3 (67%)
Nuclear localization signal 2. /evidence=ECO:0000269|PubMed:14729065 91..95 1/3 (33%)
Nuclear localization signal 3. /evidence=ECO:0000269|PubMed:14729065 141..145 1/3 (33%)
Nuclear localization signal 4. /evidence=ECO:0000269|PubMed:14729065 167..170 1/2 (50%)
JmjC 174..288 CDD:334913 88/113 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..403 34/75 (45%)
Nuclear localization signal 5. /evidence=ECO:0000269|PubMed:14729065 373..378 2/4 (50%)
PSRNP_001262832.1 JmjC 179..293 CDD:202224 88/113 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149789
Domainoid 1 1.000 237 1.000 Domainoid score I2334
eggNOG 1 0.900 - - E1_KOG2130
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9046
Inparanoid 1 1.050 557 1.000 Inparanoid score I1108
Isobase 1 0.950 - 0 Normalized mean entropy S2343
OMA 1 1.010 - - QHG58658
OrthoDB 1 1.010 - - D369628at33208
OrthoFinder 1 1.000 - - FOG0005710
OrthoInspector 1 1.000 - - oto90857
orthoMCL 1 0.900 - - OOG6_101565
Panther 1 1.100 - - LDO PTHR12480
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3963
SonicParanoid 1 1.000 - - X4108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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