DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMPCA and UQCR-C2

DIOPT Version :10

Sequence 1:XP_005266116.1 Gene:PMPCA / 23203 HGNCID:18667 Length:563 Species:Homo sapiens
Sequence 2:NP_648905.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster


Alignment Length:476 Identity:104/476 - (21%)
Similarity:189/476 - (39%) Gaps:83/476 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    52 PKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLA 116
            |:||      .:.....|..|:|.|.||:.:.......|.:::.:|||.|:..:.|.:|.| :||
  Fly    23 PRPV------GDLSAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLL-RLA 80

Human   117 FSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEV 181
            ...:.:..:...|...:::.||.......|:...|.|:..:...:|.:..|.| :|||.....|:
  Fly    81 GGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQD-LLQPAFKPWEL 144

Human   182 EMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYY 246
            ......|..:|..::    .|....|::|:||:| |.:|...:.|...:.|::.|.|..|:...:
  Fly   145 VDNAKTVVNQLNAVS----TEERAIELVHKAAFR-NGLGNSIYSPRFQLGKLSSESLLHYVAQTF 204

Human   247 TPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGP 311
            ...|..:.|||:::..|...|:....   |:.||..|      .|.:.||.|:  :|.|.     
  Fly   205 AAGRAAVVGVGIDNNTLAGFAQTLQF---PSGGSKAA------SANWYGGDAR--KDTSG----- 253

Human   312 TPIPELTH----IMVGLESCSFLEEDFIPFAVLNMMMG---------GGGSFS-----AGGPGKG 358
                   |    .:.|..:.:...::.:.||:|...:|         ..|.|.     |||.|. 
  Fly   254 -------HRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGA- 310

Human   359 MFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVE 423
                             :..:.:.||.|.||.....|||.:.:.:.||.:.:.  |...:|...:
  Fly   311 -----------------SVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRG--LKSASVSDKD 356

Human   424 LERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIREYRRGSEGLPQASARLRG 488
            :.|.|..|.:.::....|...:.:::|||...||:......|...|       :|:.|:..:...
  Fly   357 VARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAI-------DGISQSQVQEAA 414

Human   489 GRLALPQAVVGLWYVHHTQNL 509
            .::...:..||.  :.|..|:
  Fly   415 KKVGSSKLAVGA--IGHLANV 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMPCAXP_005266116.1 PqqL 62..441 CDD:440377 87/396 (22%)
UQCR-C2NP_648905.1 PqqL 23..428 CDD:440377 102/469 (22%)

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