DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMPCA and CG8728

DIOPT Version :10

Sequence 1:XP_005266116.1 Gene:PMPCA / 23203 HGNCID:18667 Length:563 Species:Homo sapiens
Sequence 2:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster


Alignment Length:549 Identity:260/549 - (47%)
Similarity:355/549 - (64%) Gaps:50/549 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     6 LAATRLLR------GSGSWGCSRLRFGPPAYRRFSSGGAYPNI----------PLSSPLPGVPKP 54
            |.||::..      |||: |..::..|.    |.|.|....|.          ||:.|||.:|:.
  Fly    23 LMATKVTSLGGDEVGSGT-GIGQITGGV----RTSDGPQKVNTPSKEIVTHLPPLTEPLPNLPEA 82

Human    55 VFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSS 119
            |:|....:... ||||||.||||:||:.::|||||||::|:||.|||..|.||::||||||||:|
  Fly    83 VYAAPLAESAI-TKVTTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVAYPSGVSHFLEKLAFNS 146

Human   120 TARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 184
            |..|.:||.||..|||:|||||||:||||.:||.|.||:.:|:|..|||||.|:|.|:|:||.:.
  Fly   147 TVNFPNKDAILKELEKNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLADVTLRPTLSDQEVSLA 211

Human   185 RMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPD 249
            |.||.||||.|.:||:.||:|.:|||.||:|:||:||.:.||.||:..|||.||.:||:.:::|.
  Fly   212 RRAVNFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHINRNVLMNYLKYHHSPK 276

Human   250 RMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVD------IDRSVAQYTGGIAKLERDMSNVS 308
            |||:|||||:|:.||...::|.:..:..| ..||::      :|.|:||||||:.|.:.::    
  Fly   277 RMVIAGVGVDHDELVSHVQRYFVEDKAIW-ETEALEDSGPKQVDTSIAQYTGGLVKEQCEI---- 336

Human   309 LGPTPI------PELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNV 367
                ||      |||.|:::|.|.||..::||:|..|||:|||||||||||||||||:||||..|
  Fly   337 ----PIYAAAGLPELAHVILGFEGCSHQDKDFVPLCVLNIMMGGGGSFSAGGPGKGMYSRLYTKV 397

Human   368 LNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLT 432
            |||:||||:||:|:|:|.|.||.|:|.||.|:.:.:|||::|:|.:.|.......||.|:|.||.
  Fly   398 LNRYHWMYSATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREELMRSKIQLQ 462

Human   433 SMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIREYRRGSEGLPQASARLRGGRLALPQAV 497
            |||:||||||||:|||||||||.|..||.|......|....  :..:.:.:.||    |:.|.:|
  Fly   463 SMLLMNLESRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVT--AADIQRVAQRL----LSSPPSV 521

Human   498 VGLWYVHHTQNLGPSPVVLSRGGQ-GQGR 525
            .....:|:...:......:|..|: |.||
  Fly   522 AARGDIHNLPEMSHITNAVSGSGRTGLGR 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMPCAXP_005266116.1 PqqL 62..441 CDD:440377 210/390 (54%)
CG8728NP_610333.1 PqqL 79..521 CDD:440377 236/457 (52%)

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