DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATG4B and Atg4b

DIOPT Version :10

Sequence 1:XP_005247049.2 Gene:ATG4B / 23192 HGNCID:20790 Length:415 Species:Homo sapiens
Sequence 2:NP_650452.1 Gene:Atg4b / 41868 FlyBaseID:FBgn0038325 Length:668 Species:Drosophila melanogaster


Alignment Length:410 Identity:124/410 - (30%)
Similarity:186/410 - (45%) Gaps:112/410 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    24 EPVWILGRKY-----------SIFTEK------------------------------------DE 41
            :|||:|||.|           |..||.                                    ||
  Fly   174 QPVWLLGRCYHRRFTPPVSMESSITELPSGADTTPDNATSAFDSIQATSTSTSLYPALNPQQIDE 238

Human    42 IL---------------------------SDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCG 79
            |:                           .|..||:|.|||:.||.:.|:..|||.|||||||.|
  Fly   239 IVVPQELGMDAVENQVGEQPWEEGIEGFRRDFYSRIWMTYRREFPIMNGSNYTSDCGWGCMLRSG 303

Human    80 QMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFI-------DRKDSYYSIHQIAQMGVGEGK 137
            ||:|||.|:|..|||.||:....:...:|...::..|       ..|.|.:|||.:.::|...||
  Fly   304 QMLFAQGLICHFLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGK 368

Human   138 SIGQWYGPNTVAQVLK--------KLAVFDTWSSLAVHIAMDNTVVMEEIRRLC-------RTSV 187
            ..|.||||.:|:.:||        :.|.||   :::|::|.|.|:.:::|...|       :..|
  Fly   369 KPGDWYGPASVSYLLKHALEHAAQENADFD---NISVYVAKDCTIYLQDIEDQCSIPEPAPKPHV 430

Human   188 PCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQS 252
            |...|....|::.:           |.:...|:.|::|||||||...:|..|...||........
  Fly   431 PWQQAKRPQAETTK-----------TEQQQHWKSLIVLIPLRLGSDKLNPVYAHCLKLLLSTEHC 484

Human   253 LGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSI 317
            ||::||||..:.||:|:..:.||:||||..|..|:.....| ...||||:.|. ::..:::|||.
  Fly   485 LGILGGKPKHSLYFVGFQEDRLIHLDPHYCQEMVDVNQENF-SLHSFHCKSPR-KLKASKMDPSC 547

Human   318 AVGFFCKTEDDFNDWCQQVK 337
            .:||:|.|:.||:::.:.|:
  Fly   548 CIGFYCATKSDFDNFMESVQ 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATG4BXP_005247049.2 Peptidase_C54 39..335 CDD:460915 113/380 (30%)
Atg4bNP_650452.1 Peptidase_C54 263..565 CDD:460915 110/317 (35%)

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