| Sequence 1: | NP_055971.2 | Gene: | RCOR1 / 23186 | HGNCID: | 17441 | Length: | 485 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001073510.1 | Gene: | rcor1 / 569294 | ZFINID: | ZDB-GENE-050506-79 | Length: | 458 | Species: | Danio rerio |
| Alignment Length: | 501 | Identity: | 317/501 - (63%) |
|---|---|---|---|
| Similarity: | 360/501 - (71%) | Gaps: | 76/501 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MPAMVEKG-PEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAA 64
Human 65 PNNGQNKSLAAAAPNGNSSSNSWEEGSSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAKLARRSQE 129
Human 130 RDNLGMLVWSPNQNLSEAKLDEYIAIAKEKHGYNMEQALGMLFWHKHNIEKSLADLPNFTPFPDE 194
Human 195 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQKREREE 259
Human 260 SEDELEEANGNNPIDIEVDQNKESKKE----VPPTETVP--------------QVKKEKHSTQAK 306
Human 307 --NRAKRKPPKGMFLSQEDVEAVSANATAATTVLRQLDMELVSVKRQIQNIKQTNSALKEKLDGG 369
Human 370 IEPYRLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNID 434
Human 435 EVLQEWEAEHGKEETNGPSNQK-PVKSPDNSIKMPEE---EDEAPV 476 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RCOR1 | NP_055971.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..26 | 16/25 (64%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 49..110 | 29/60 (48%) | |||
| Interaction with HDAC1. /evidence=ECO:0000269|PubMed:11516394 | 78..257 | 156/178 (88%) | |||
| ELM2 | 105..158 | CDD:307553 | 38/52 (73%) | ||
| SANT | 194..238 | CDD:328756 | 41/43 (95%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 244..314 | 40/89 (45%) | |||
| Interaction with KDM1A. /evidence=ECO:0000269|PubMed:16885027 | 296..384 | 51/89 (57%) | |||
| Myb_DNA-binding | 385..428 | CDD:306708 | 42/42 (100%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 442..485 | 15/39 (38%) | |||
| rcor1 | NP_001073510.1 | ELM2 | 57..109 | CDD:279754 | 38/52 (73%) |
| SANT | 144..190 | CDD:197842 | 43/45 (96%) | ||
| SANT | 145..189 | CDD:304392 | 41/43 (95%) | ||
| SANT | 354..400 | CDD:197842 | 44/45 (98%) | ||
| Myb_DNA-binding | 355..398 | CDD:278669 | 42/42 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C194334518 | |
| Domainoid | 1 | 1.000 | 318 | 1.000 | Domainoid score | I6882 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1194 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H32246 | |
| Inparanoid | 1 | 1.050 | 578 | 1.000 | Inparanoid score | I5531 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG51466 | |
| OrthoDB | 1 | 1.010 | - | - | D209669at7742 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001182 | |
| OrthoInspector | 1 | 1.000 | - | - | oto43489 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_117772 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR16089 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3377 |
| SonicParanoid | 1 | 1.000 | - | - | X1336 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 1 | 1.500 | - | - | ||
| 17 | 17.340 | |||||