DRSC/TRiP Functional Genomics Resources

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Protein Alignment LARP4B and Larp7

DIOPT Version :10

Sequence 1:XP_016871476.1 Gene:LARP4B / 23185 HGNCID:28987 Length:1273 Species:Homo sapiens
Sequence 2:NP_524795.2 Gene:Larp7 / 44900 FlyBaseID:FBgn0260771 Length:595 Species:Drosophila melanogaster


Alignment Length:537 Identity:109/537 - (20%)
Similarity:188/537 - (35%) Gaps:182/537 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   602 GDGDQGHENAALPDP-QESDPADMNALALGPSEYDSLPENSETGGNESQPDSQEDPRE------- 658
            |:|.:...:|..||| ..::||:.|              :.|....::.||.::..|:       
  Fly    11 GEGQEPATSAEKPDPAAPTEPAEEN--------------SKEPAPEDASPDKKDGGRKRKRHLFN 61

Human   659 VLKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVD 723
            .::..:||.....||:.|.:|...::.|.|||:......:.||.|:.||..|.:.|.:..|:::|
  Fly    62 SIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELD 126

Human   724 EKGEKVR-----PNQNRCIVILREISEST-PVEEVEALFKGD---------------NLPKFINC 767
            |...||:     |:|       |::::.| .||.:.|....|               :||.:...
  Fly   127 ETELKVKRRTKLPDQ-------RDVNDKTLYVEALPANATHDWLKEVFSRYGPVAYVSLPHYPGT 184

Human   768 ----EFAYNDNWFITFETEADAQQAYKYLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLD 828
                |||     ||.||.....::|       ||.|      |:|:. .:::.|       .|.|
  Fly   185 KKIKEFA-----FIEFEKSGSLEKA-------VKAF------AQIQG-VLSVET-------DPSD 223

Human   829 V----SLYAQQRYATSFYFPPMYSPQQQFPLYSL---ITPQTWSATHSYLDPPLVTPFPNTGFIN 886
            :    |...||:.......|...:.|.:.|..:|   .|.:.....|......|....|:.....
  Fly   224 LASVRSFQQQQQIQQKAEQPQSEAEQVELPKRNLKREATDKDREEIHEVKRVKLEEGQPSETSTA 288

Human   887 GFTS------------------------------------------PAFKPAASPLTSLRQYPPR 909
            |.|:                                          |..:|:|..|..|    |:
  Fly   289 GETASETDAEGTAEASEQEDKTEATDGDEAAKKRRRKRKKKAIVDKPNIEPSALELKVL----PK 349

Human   910 SRNPSKSHLRHAIPSAERGPGLLESPSIFNFTADRLINGVRS-------PQTRQ-AGQTRTRIQN 966
            :   |.|.:|:...:.:|                |:::..:|       ||.:| ....:|...|
  Fly   350 T---SWSSMRNKYLNLQR----------------RIVSEAKSKLWRENHPQNQQHPHHQQTSHPN 395

Human   967 -------PSAYAKREAG---PGRVEPGSLESSPGLGRGRK-------NSFGYRKKREEKFTSSQT 1014
                   |.|..:.|.|   |.....|::|::|...:.||       |.:|     .....|:::
  Fly   396 HPKPSQLPEAVKEEETGGEVPSDGGEGAVEAAPVPAKRRKAVHKMNMNFYG-----AGGVESTKS 455

Human  1015 QSPTPPKPPSPSFELGL 1031
            :.|:..:.|...:|.||
  Fly   456 EEPSQERTPLFKYEPGL 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LARP4BXP_016871476.1 LARP_5 657..731 CDD:153405 23/85 (27%)
RRM_LARP5 736..812 CDD:410105 21/95 (22%)
Larp7NP_524795.2 LA 57..135 CDD:128955 22/77 (29%)
RRM1_LARP7 148..220 CDD:409732 21/97 (22%)
RRM2_LARP7 471..548 CDD:409958 2/2 (100%)

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