DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC35D1 and frc

DIOPT Version :9

Sequence 1:XP_006710541.1 Gene:SLC35D1 / 23169 HGNCID:20800 Length:382 Species:Homo sapiens
Sequence 2:NP_001137962.1 Gene:frc / 39943 FlyBaseID:FBgn0042641 Length:373 Species:Drosophila melanogaster


Alignment Length:377 Identity:184/377 - (48%)
Similarity:252/377 - (66%) Gaps:36/377 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     2 AEVHRRQHARVKGEAPAKSSTL--RDEEELGMASAETLTVFLKLL-AAGFYGVSSFLIVVVNKSV 63
            ::|..|:.....|.:..:||.|  ...:||.....|...:|:|.: :|.|||:|||:|.||||:|
  Fly    20 SDVGNRELEEKMGGSADRSSLLDGSGSKELSHREREDSALFVKKIGSALFYGLSSFMITVVNKTV 84

Human    64 LTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQITGLFSTK 128
            ||:|.|||.|.:.|||:.|::.||.:||.|::|.||.|.||...|.|||||::.||.:.||..||
  Fly    85 LTSYHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFPPLQRNTFAKIFPLPLIFLGNMMFGLGGTK 149

Human   129 KLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFILI 193
            .|:||||..|||||||.||..|..:|....|..::::|:|||.||.:|||.||:|::.||.:::|
  Fly   150 TLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIGGALLAASDDLSFNMRGYIYVMI 214

Human   194 NDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGDAQKLPVSQDRRFQALWQR 258
            .:.|||:||.|||:|||:.|:|||||:|||:|||.||.||:.|.||:.                 
  Fly   215 TNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPALALNYVTGNL----------------- 262

Human   259 ACLVLCHTQNDQAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILI 323
                      |||:.||.|.|::|::||.|||||||||.|:|:||||:|||||||||||:|||.:
  Fly   263 ----------DQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVGCLKNICV 317

Human   324 TYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLD 375
            ||:||..||||:|:|.|.||:|||:..||:|:|:||      ::..|.:|.|
  Fly   318 TYLGMFIGGDYVFSWLNCIGINISVLASLLYTYVTF------RRKRAPDKQD 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC35D1XP_006710541.1 VRG4 49..356 CDD:227402 165/306 (54%)
frcNP_001137962.1 TPT 67..348 CDD:281186 166/307 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 340 1.000 Domainoid score I1094
eggNOG 1 0.900 - - E1_COG5070
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22870
Inparanoid 1 1.050 362 1.000 Inparanoid score I2199
Isobase 1 0.950 - 0 Normalized mean entropy S1931
OMA 1 1.010 - - QHG55087
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002341
OrthoInspector 1 1.000 - - otm41316
orthoMCL 1 0.900 - - OOG6_102424
Panther 1 1.100 - - LDO PTHR11132
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R503
SonicParanoid 1 1.000 - - X1771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.810

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