DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vsig10 and DIP-delta

DIOPT Version :9

Sequence 1:NP_001028483.2 Gene:Vsig10 / 231668 MGIID:2448533 Length:558 Species:Mus musculus
Sequence 2:NP_001097508.2 Gene:DIP-delta / 5740816 FlyBaseID:FBgn0085420 Length:469 Species:Drosophila melanogaster


Alignment Length:482 Identity:98/482 - (20%)
Similarity:168/482 - (34%) Gaps:132/482 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    39 SEVLPGIHPDLEAVAIGEVHDNVTLRCGSASGSRGLVTWYRNDSEPAFLVSFNSSLPPAAPRFSL 103
            ::.:|.:     .||:|.   :..|.|.........|.|...|.:  .:::.:..:....||:|:
  Fly    47 AQPIPNV-----TVAVGR---DANLPCVVEHLGGYKVAWIHIDRQ--MILTIHRHVISRIPRYSI 101

Mouse   104 ---EDAGALRIEALRLEDDGNYTCQEVLNETHWFPVRLRVASGPAYVEVNISATGTLPNGTLYAA 165
               ::...|.:.....:|.|.|.||...|     |:..:|......|..||....:.|:..  |.
  Fly   102 TYTDNTWLLHVNQAHQDDRGYYMCQVNTN-----PMISQVGYLQVVVPPNILDIESTPSSV--AV 159

Mouse   166 RGSQ-VDFNCCSAAQPPPEVEWWIQTHSIPEFLGKNLS-----------ANSFTLMLMSQNLQGN 218
            |.:| ::..|.:...|.|::.|..:.       |:.::           |:...|..:|:|..|.
  Fly   160 RENQNINMTCRADGFPAPKIIWRRED-------GEEIAVEKKKKVLVYDADVLPLTKVSRNEMGA 217

Mouse   219 YTCSATNVLSGRQRKVTTELL-------VYWPP------PSAPQCSVEVSSESTTLELACNWDGG 270
            |.|.|||   |....|:..::       :.|.|      ||....:::..:|:            
  Fly   218 YLCIATN---GVPPSVSKRIILDVEFSPMIWVPNQLVGAPSGTDVTIDCHTEA------------ 267

Mouse   271 YPDPTFLW--------------TEEPGGTIMGNSKLQTLSPAQLLEGKKFKCVGNHILGPESGAS 321
            :|.....|              |:....:...:.|| |:...|..:...::|:..:.||...|:.
  Fly   268 HPKAIIYWVYNSVMVLPSKKYKTDYTENSYRAHMKL-TIRNLQYGDFGNYRCISKNSLGETEGSI 331

Mouse   322 CVVKLSSPLLPSQPMRTCFVGGNVTLTCEVSGAN---PPARIQWLRNLTQPAIQPSSHYII---- 379
            .|.::..|..||:         .||.|...|..|   |.:     ||.|..::|....|.:    
  Fly   332 RVYEIPLPSTPSK---------QVTHTTVESRENNIIPSS-----RNDTTKSLQTDVGYAMKNDL 382

Mouse   380 -------TQQGQSSSLTIHNCSQDLDEGFYYCQAENLVGVRATNIWLSV--KEPLNIG------- 428
                   :..|.|||....:.|.         |...|.|..|.|...|:  |..|.||       
  Fly   383 YPGSASSSSSGGSSSAASSSSSM---------QTSALPGGVAGNSLSSMGSKGSLAIGKSTFYTE 438

Mouse   429 ----GIVGTVVSLLLLGLAVVSGLTLY 451
                ....:.|:.|||..|::.|..:|
  Fly   439 RPPNEYAASSVAGLLLHRALLFGSGIY 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vsig10NP_001028483.2 Ig 47..135 CDD:299845 18/90 (20%)
IG_like 55..140 CDD:214653 17/87 (20%)
IG_like 160..240 CDD:214653 20/98 (20%)
Ig <184..238 CDD:299845 14/64 (22%)
IG_like 341..421 CDD:214653 21/93 (23%)
Ig 345..418 CDD:143165 21/86 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..515
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..558
DIP-deltaNP_001097508.2 IG 51..143 CDD:214652 21/106 (20%)
Ig 145..238 CDD:416386 23/104 (22%)
Ig strand A 145..149 CDD:409353 2/3 (67%)
Ig strand A' 154..159 CDD:409353 1/6 (17%)
Ig strand B 165..172 CDD:409353 1/6 (17%)
Ig strand C 178..183 CDD:409353 1/4 (25%)
Ig strand C' 185..187 CDD:409353 0/8 (0%)
Ig strand D 195..199 CDD:409353 0/3 (0%)
Ig strand E 203..209 CDD:409353 1/5 (20%)
Ig strand F 216..223 CDD:409353 3/6 (50%)
Ig strand G 230..238 CDD:409353 1/7 (14%)
Ig 242..333 CDD:416386 16/103 (16%)
Ig strand A' 250..253 CDD:409353 0/2 (0%)
Ig strand B 259..266 CDD:409353 0/6 (0%)
Ig strand C 272..277 CDD:409353 1/4 (25%)
Ig strand C' 281..283 CDD:409353 0/1 (0%)
Ig strand D 289..293 CDD:409353 1/3 (33%)
Ig strand E 295..305 CDD:409353 2/10 (20%)
Ig strand F 314..322 CDD:409353 1/7 (14%)
Ig strand G 325..334 CDD:409353 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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