DRSC/TRiP Functional Genomics Resources

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Protein Alignment NCDN and Neurochondrin

DIOPT Version :9

Sequence 1:NP_001014839.1 Gene:NCDN / 23154 HGNCID:17597 Length:729 Species:Homo sapiens
Sequence 2:NP_649658.1 Gene:Neurochondrin / 40796 FlyBaseID:FBgn0037447 Length:723 Species:Drosophila melanogaster


Alignment Length:739 Identity:207/739 - (28%)
Similarity:345/739 - (46%) Gaps:103/739 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    43 LREAKNDSEQFAALLLVTKAVKAGDIDAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALG 107
            |:..|:|:|:||||.:|||.||..|.:|..::.:|:|:||.|..:||.:|:.|:.||..|.:::.
  Fly    15 LKGTKSDTEKFAALFMVTKLVKGKDCNAAGKKLLFEAIGFPFLKKLLVSKDLPNDCPPLVYKSVA 79

Human   108 VALLACFCSDPELAAHPQVLNKIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHL 172
            :::|.|||.:.|||.|..:::.||.|...:....|.|......::.:.|.||.::|....|.:.|
  Fly    80 LSILTCFCQEEELATHKDIIDAIPTLLEIVEQADDEDYEDNLIVVSEAYSCLKSIASHEPGQQAL 144

Human   173 IAGGTVSALCQAYLGHGYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASK 237
            :|.|.:..:.|.|....:..|:||.|:|.|:.......|.|......|:::.::.|.:..:...|
  Fly   145 LATGAIPKMSQIYSAQSFQTDEALHLIVLLVKQFGVVSWPEDPTAFHALIQRIALDMETDDTERK 209

Human   238 FELCQLLPLFLPPTTVPPECYRD--------------LQAGLARILGSKLSSWQRNPALKLAARL 288
            :|||::|      ..:...|.|:              |..|...||.:|:...||:|||.|.|..
  Fly   210 YELCRIL------ADILITCRREIVINSLEGQIWPESLFKGCGDILKAKIGPKQRDPALHLIATT 268

Human   289 AHACGSDWIPAGSSGSKFLALLVNLACVEVRLALEETGTEV---KEDVVTACYALMELGIQECTR 350
            .|..|..|.......:.||.|| .|..:|||:.::|...|.   :.:::|.|::::|..| |...
  Fly   269 LHVLGIQWAFMDEQKTFFLQLL-QLGAIEVRMQMDEKKLETTFKQAELLTCCFSILEHCI-EYMA 331

Human   351 CEQSLLKEPQKVQLVSVMKEAIGAVIHYLLQVGSEKQKE-------PFVFASVRILGAWLAEETS 408
            .:|..|:..:|....:.:|.|...|:..|.:|..:|.:|       .||||.|::|.||||:||:
  Fly   332 TDQLDLEPKEKQTTYTALKGAFNQVLAVLTRVSQDKIRESSNPKDKKFVFAIVKVLSAWLAQETT 396

Human   409 SLRKEVCQLLPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTW---------PGDALRLL 464
            ::|..:.:||||:::.|...::|.:                     ||         |.|.||::
  Fly   397 AMRPAIYKLLPFMLKVANESFQELK---------------------TWRAGTREGEPPIDVLRIM 440

Human   465 LPGWCHLTVEDGPREILIKEGAPSLLCK----YF-LQQWE------------LTSPGHDTSVLPD 512
            ||..||..||:..|.:|.......:|.:    || :..|:            :..|  |....|:
  Fly   441 LPALCHFAVEEEARRVLFTHKQDEVLLESLEFYFSIAHWKRPPIPRAERLKRMNEP--DPVPTPE 503

Human   513 S------VEIGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNTLMTSLPALVQQQGRLLLAANVAT 571
            .      ....:...|:|.:|..|..|...:....|.:|:..::.:||.|......|::..|:|.
  Fly   504 QQAEMKVARSAIVALCNILMNFTVLEPKKAEDGPTFANLLKFVVENLPELKDTPDNLVIHGNLAV 568

Human   572 LGLLMARLLSTSPALQGTPASRGFFAAAILFLSQSHVARATPGSDQAVLALSPEYEGIWADLQEL 636
            ||||:.:..|...........| :..|.|.||..::  .....:|...|.:|..|:|.|:||.||
  Fly   569 LGLLLLKQQSKKVKQNDFSICR-YIQATIRFLWDAY--NIDESNDPTALVVSIAYKGYWSDLSEL 630

Human   637 WFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSVSPNSVKPEMVAAYQGVLVELARAN--- 698
            ||||||...|.:||:|||:..||.|.|.:.:::.|..|...::...:.:||:..|.:|...|   
  Fly   631 WFLGMQTMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQLVDVNGDV 695

Human   699 ----------RLCREAMRLQAGEE 712
                      |:||....:..|::
  Fly   696 QAVLKKADALRVCRNHRMMDLGKK 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NCDNNP_001014839.1 Neurochondrin 30..637 CDD:336138 179/649 (28%)
NeurochondrinNP_649658.1 Neurochondrin 2..631 CDD:283244 179/649 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144946
Domainoid 1 1.000 255 1.000 Domainoid score I2059
eggNOG 1 0.900 - - E1_KOG2611
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8064
Inparanoid 1 1.050 299 1.000 Inparanoid score I2721
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49523
OrthoDB 1 1.010 - - D157138at33208
OrthoFinder 1 1.000 - - FOG0007454
OrthoInspector 1 1.000 - - oto88369
orthoMCL 1 0.900 - - OOG6_106255
Panther 1 1.100 - - LDO PTHR13109
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4680
SonicParanoid 1 1.000 - - X6328
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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