DRSC/TRiP Functional Genomics Resources

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Protein Alignment CIC and IXR1

DIOPT Version :10

Sequence 1:NP_001291744.1 Gene:CIC / 23152 HGNCID:14214 Length:2517 Species:Homo sapiens
Sequence 2:NP_012893.3 Gene:IXR1 / 853836 SGDID:S000001515 Length:597 Species:Saccharomyces cerevisiae


Alignment Length:417 Identity:82/417 - (19%)
Similarity:121/417 - (29%) Gaps:139/417 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   838 GPGRGCRETPVPPGVASGKPGL---PPPLPAPV--PITVPPAAPTAVAQPMPAFGLASSPFQPVA 897
            |.|...........|:||....   |..|.|..  |.|...||....|.  ||..|:..| |...
Yeast   181 GTGASSNNNSNNNNVSSGNNSTSSNPAQLAASQLNPATAAAAAANNAAG--PASYLSQLP-QVQR 242

Human   898 FHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEP----------------------RS 940
            ::|:....|..|:..|...:.|....... .||.:..|::|                      :.
Yeast   243 YYPNNMNALSSLLDPSSAGNAAGNANTAT-HPGLLPPNLQPQLTHHQQQMQQQLQLQQQQQLQQQ 306

Human   941 VAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPER 1005
            ..:...|.|.......|....:|..:.||  .|||....|...:........:..|      |:|
Yeast   307 QQLQQQHQLQQQQQLQQQHHHLQQQQQQQ--QHPVVKKLSSTQSRIERRKQLKKQG------PKR 363

Human  1006 PPGATCPESPGPGPPHPLGVVESGKGPPPTTEEEASGPPGEPRLDSETESDHDDAFLSIMS---- 1066
            |..|                                                  .||..||    
Yeast   364 PSSA--------------------------------------------------YFLFSMSIRNE 378

Human  1067 -----PEIQLPLPPGKRRTQSLSALPKERDSSSEKDGRSP------NKREKDHI----------- 1109
                 ||.::|         .||.|...|......|.:.|      ...||..:           
Yeast   379 LLQQFPEAKVP---------ELSKLASARWKELTDDQKKPFYEEFRTNWEKYRVVRDAYEKTLPP 434

Human  1110 RRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHP 1174
            :||...|:.|::..|..|.:.:|::....::||:||.|..|.|.:|.:|       .|.:.|...
Yeast   435 KRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAEY-------TETYKKRLK 492

Human  1175 DWKWCNKDRKKSSSEAKPTSLGLAGGH 1201
            :|:.|..|  ::.....||      ||
Yeast   493 EWESCYPD--ENDPNGNPT------GH 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CICNP_001291744.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..197
DUF4819 252..346 CDD:465014
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..325
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..483
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 531..579
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 608..640
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 658..767
PHA03307 743..>1105 CDD:223039 55/308 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 812..842 2/3 (67%)
dnaA 871..>1046 CDD:455861 32/196 (16%)
Interaction with ATXN1. /evidence=ECO:0000250|UniProtKB:Q924A2 937..955 3/39 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 955..1110 28/180 (16%)
HMG-box_CIC-like 1108..1185 CDD:438806 21/87 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1179..1220 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1235..1274
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1290..1347
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1379..1539
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1595..1628
PHA03247 <1765..2185 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1799..1818
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2064
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2100..2342
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2430..2517
IXR1NP_012893.3 NHP6B <338..501 CDD:227935 44/236 (19%)
Blue background indicates that the domain is not in the aligned region.

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