DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CIC and cicb

DIOPT Version :10

Sequence 1:NP_001291744.1 Gene:CIC / 23152 HGNCID:14214 Length:2517 Species:Homo sapiens
Sequence 2:XP_005173569.3 Gene:cicb / 323246 ZFINID:ZDB-GENE-030131-1966 Length:2632 Species:Danio rerio


Alignment Length:3055 Identity:1151/3055 - (37%)
Similarity:1380/3055 - (45%) Gaps:988/3055 - (32%)


- Green bases have known domain annotations that are detailed below.


Human     1 MKPMKKACTGLSGPGSGSKSPPATRAKALRRRGAGEGD---------------KPEEEDDEAQQP 50
            |:|.||         ...:||.:.|.|..|:|| |:.|               .|.:||:...:.
Zfish     1 MRPPKK---------QRGRSPLSARGKGTRKRG-GKLDGHSQTTLPAPSHQKYTPSKEDNSLDKQ 55

Human    51 QPQSGPEEAEEGEEEEAERGPGAEGPPLELHPGDPAPGP-------------------------- 89
            ...|....:|..:|:..||.............|:.|..|                          
Zfish    56 IKSSNMTNSEGLKEQIKERTMETSKSEENAGVGNKAKSPKNINTNNLTDNTDSIKIASNAHENSH 120

Human    90 --------------------------------AEDPKGDGEAGRWEPSL----------SRKTAT 112
                                            .::....|.:.....||          ||||||
Zfish   121 SNSTDICNTNTQNLTSTNSKSSNQHTNSTASNTQNTNNIGNSLNKSSSLSANHTSTTLSSRKTAT 185

Human   113 FKSRAPKKKYVEEHGAGSSGV---------------AGAPE------------------------ 138
            ||:|.|||||:.||.|.|:..               .|:|:                        
Zfish   186 FKARVPKKKYMYEHQATSTSPISSKPVTQLTLHINHLGSPQNSISQNTTPVIRNDLFKANTSDLD 250

Human   139 --------------------------------------ERVRTPEEASGLGVPPRPPTSTRSSST 165
                                                  |:|....||.|.|  .:.|.|.|||||
Zfish   251 DSGNSRSRLEIANIASTETSKGDRIMGDMLKSEVPSEVEKVIQMGEADGYG--EQAPNSVRSSST 313

Human   166 DTASEHSADLED-EPAEAC---------------------------GPGPW---PPGSTSGSYDL 199
            |||||||.|||. ||  :|                           .|...   ..||.:.:..|
Zfish   314 DTASEHSVDLEVLEP--SCMQLNSGNHVRASRRFNPLNNSTLSVVLSPNHTQVEQEGSATVAETL 376

Human   200 -RQLRSQRVLARR-------------GDGLFLPAVVRQVRRSQ-DLGVQFPGDRALTFYE----- 244
             :.|::|||||||             .:.:|:..|||...:.| ::.:|..|:..|..|.     
Zfish   377 AKGLKNQRVLARRRPRRSLKEDEKLVKECIFICGVVRGSNKEQLNVELQINGEGTLLSYPFHTLV 441

Human   245 GVPGAGVDVVLDATPPPGALV-VGTAVCTCV--EPGVAAYREGVVVEVATKPAA-YKVRLSPGPS 305
            ..|...:|::|||.||...|| |||.||...  :.....||||||.:|.:..|. |.|.|     
Zfish   442 SRPHQPIDLILDAPPPGNELVEVGTRVCVPYGGDKEKEWYREGVVAQVDSHSACPYMVLL----- 501

Human   306 SQPGLPGSLPQPPQPLHR-------EPEEAVWVARSSLRLLRPPW-------EPETMLRKPPTGP 356
                      |..|...|       :...:|||||.:||||.|||       |.|....:.....
Zfish   502 ----------QEEQKKERCSKEETKQTSSSVWVARQNLRLLVPPWDGVMREKEREEREHREEIEV 556

Human   357 EEE--QAEPGATL----PPCPAALDPK----------------QPEDAEVSKISF-----GGNLG 394
            |.|  |...|..|    ||......|.                .|....|:...|     |.|.|
Zfish   557 ERELCQLSEGMDLVTAGPPRENCRFPSPDTGAHRYESTLSSSTSPAVVMVANNMFGLASRGENEG 621

Human   395 THCEE--GEEKHP-PALGTPAL------LPLPP---------------------PQLLSPPPKSP 429
            |...|  .|.:|. ..|.||.:      |.:.|                     .|:||.||..|
Zfish   622 TENRERVREREHERKQLQTPEVDMEVLRLNMAPLRDSGGPLVSGGPKTGAPNQHRQILSKPPGYP 686

Human   430 AFVGP---------GRPGEQPSPCQEGSQGG-------------SRSSSVASLEK---------- 462
            :.:..         |.|...||....||.||             |...|:..|||          
Zfish   687 SPITVVRGISGTTLGSPQPTPSSAVLGSDGGNSHHISPSVPPSPSSRGSLTPLEKTPTPSQTSTP 751

Human   463 ------GTAPAARARTPLTAAQQKYKKGDVVCTPSGIRKKFNGKQWRRLCSRDGCMKESQRRGYC 521
                  .:|.::|:||||:|.|||||||||||||:|||||||||||||||||:||||||||||||
Zfish   752 VPGSSASSASSSRSRTPLSAVQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYC 816

Human   522 SRHLSMRTKEMEG-LADSGPGGAGR-------PAAVAAREGSTEFDWGDETSRDSEASSVAARG- 577
            ||||||||||||| :.:.|.||.|.       |:.:..| .|:||:| |||||||  |..::|| 
Zfish   817 SRHLSMRTKEMEGAVGERGSGGGGESSSGTVTPSDLRGR-ASSEFEW-DETSRDS--SETSSRGT 877

Human   578 DSRPRL----VAPADLSRFEFDECEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFG 638
            ||||||    :.|.|.|||:|||||||.|||||| |||.||||||:|.||||||.||||.|||||
Zfish   878 DSRPRLGLPSLLPQDFSRFDFDECEAATMLVSLG-SRSVTPSFSPISNQSPFSPTPSPSASPLFG 941

Human   639 FRPANFSPINASPVIQRTAVRSRHLSASTPKAGVLTPPDLGPHPPPPAPRE--RHSSGILPTFQT 701
            |.|||||||.||||:.    ..||...|...:|      |..|......||  ||.|||:|:|..
Zfish   942 FHPANFSPITASPVLP----HRRHKHPSGTNSG------LPKHGTGGTEREKDRHLSGIVPSFHP 996

Human   702 NLTFTVPISPGRRKTELLPHPGALGAPGAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRA 766
            |||||||:|||:|:|:..|.|..|          ..::.|.|...|..|       ||.......
Zfish   997 NLTFTVPMSPGKRRTDAPPPPVPL----------LQEYTKPDQEQSCRD-------PSLVTNLCI 1044

Human   767 VSPAVP--------FSRSRQPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVP---- 819
            :||...        .|.:...||    ..|..|.|....::.:.|.  ||||||||||:||    
Zfish  1045 ISPQTTTVTHPQRLLSTTASSSP----ASPLSLESGSQCTISQQPL--RDSPVIVRNPEVPLIKF 1103

Human   820 --LPSKFPGEVG----TAGEVRAGGPGRGCRETPVPPGVASGK------------------PGLP 860
              ||.....||.    |........|..|. :.|||...||..                  ..:.
Zfish  1104 TELPLARVAEVDRTSFTENSQTGVHPETGL-QVPVPINAASTNGSVLLQNPTSTLVLVSTTSSIL 1167

Human   861 PPLPAPVPITVPPAAPTAVAQPMPAFGLA------------SSPF---QPVAFHPSPAALLPVLV 910
            .|.||.:| |.|.|....::.|.|..|..            |.|.   |||..||:|.||||:::
Zfish  1168 NPNPAGLP-TQPSATLACISVPSPVSGAGLIGAGDGGGQDKSCPVTLQQPVPCHPAPTALLPLIL 1231

Human   911 PSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPV 975
            |:. |.||.|.|::|||||||||||||||||.|||||||||||||:|.|||.||.|.||..||| 
Zfish  1232 PTE-TLHPVPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHP- 1294

Human   976 ASNQSKEPAESAAVAHERPPGGTGSADPERPPGATCPES-PGPGPPHPLGVVESGKGPPPTTEEE 1039
                     ::||:..|   ..:||...|...||..|.| |.|          |....||..|::
Zfish  1295 ---------QTAALKKE---SQSGSVLKEIIEGAPNPSSRPTP----------SADELPPEREKD 1337

Human  1040 ASGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKR 1104
            |.    ..|.|||||||.||.|...:.|:..:...|||||:||||||||:       |..||.||
Zfish  1338 AE----RERPDSETESDVDDPFFPSVLPDPPISASPGKRRSQSLSALPKD-------DKNSPGKR 1391

Human  1105 EKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAH 1169
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish  1392 EKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAH 1456

Human  1170 FKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLS 1234
            ||||||||||||||||||||.:    |:.|| |:.||||||||....:..:..||..:       
Zfish  1457 FKAHPDWKWCNKDRKKSSSEGR----GVPGG-KDIRERSMSETTEPPSVSMGMELKGM------- 1509

Human  1235 SDTKAPGSSSCGAERLHTVGGPGS---ARPRAFSHSGVHSLDGGE-VDSQALQELTQMVSGPASY 1295
                .||..|. :||   |||.|.   .||||||.|.:|||:..| .:.|||.||.||.      
Zfish  1510 ----GPGMVSV-SER---VGGEGHGQLTRPRAFSQSAMHSLERSERGNPQALAELAQMC------ 1560

Human  1296 SGPKPSTQYGAPGPFAAPGEGGALAATGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDD 1360
                              |:|..:...|       ..|::||..|||||||:|||||||||||||
Zfish  1561 ------------------GDGSQVGGRG-------ALSQTQRGVSEDMTSDDERMVICEEEGDDD 1600

Human  1361 VIADDGFGTTDIDLKCKERVTDSESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPG 1425
            || :|.:..:.||||||||||||:|.:.||:  ||.:   ::||:|||.||              
Zfish  1601 VI-EDSYPGSSIDLKCKERVTDSDSENGSGD--EGER---KRVFAPVICSS-------------- 1645

Human  1426 PPDPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGP 1490
                  ::|.|:|.  |.|.||..:|...:.||    |...:..|:|.|...       .|.||.
Zfish  1646 ------SYGPGHGR--SVSLSSYPTSRRFSDTS----SKRKRTIEAGDGEQR-------EGEGGA 1691

Human  1491 ATPSKATRFLPMDPATFRRKRPESVGGLEPPGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGAR 1555
            :.||                          .|.|::.   |.||.:...|           |..|
Zfish  1692 SQPS--------------------------AGQSILV---SSGGGVSSML-----------GAVR 1716

Human  1556 VPSAPAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPND--TAGART 1618
            |                    |:|:||||||||.|||||||||          ||:|  .|..:|
Zfish  1717 V--------------------ASTVVTNVVRPVVSTPVPIASK----------SPHDRKLAPPQT 1751

Human  1619 EMGTGSRVPG---GSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYG 1680
            ::..|....|   .:..|....||      ::||:|  :..|    .|:| ..||||::|    |
Zfish  1752 QLLIGHGATGNTAAASAGGGGYYS------SSSPSP--INAP----AGQA-GLVTNLVLG----G 1799

Human  1681 A-PAPPAVQFIAQGAPGGGTTAGSGAGAGSGPNGPVPLGILQ-----PGALGKAGG---ITQVQY 1736
            . .||||||.:....|      .....:.:..|||:||.:||     .|:|..:.|   ||||||
Zfish  1800 TFQAPPAVQLVTPPPP------SQNPASPAHSNGPLPLPVLQSHILPSGSLAPSSGQKPITQVQY 1858

Human  1737 ILPTLPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPP-----GTSTNGKVLAATAPTPGIP 1796
            |||||......:|:|..|        |.|   ||| ||||.     .|..|||.....:...|: 
Zfish  1859 ILPTLSANNPKSPSPQQA--------SQP---TSI-FTLPTALPTHATLANGKQSGYVSSPVGV- 1910

Human  1797 ILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQP-LPLVSPPFSV 1860
                  .:|..:.|:.|||           |.||:|||:|    :||...|..| .|||:||  :
Zfish  1911 ------VSPGARVQTQSPV-----------LQGKMLVPMA----TVRAAPAPSPQFPLVAPP--L 1952

Human  1861 PVQNGAQPPSKIIQLTPVPV---STPS-GLVPPLSP-------ATLPGPTSQP-QKVLL-PSSTR 1912
            |||||||..|||||:.|:||   ..|| |.|.|.||       ||:..|.|.| |.||| |..||
Zfish  1953 PVQNGAQAGSKIIQIAPMPVVQSQLPSAGPVQPGSPFSVTMGTATVVAPGSTPSQTVLLPPPPTR 2017

Human  1913 ITYVQSAGG--HALPLGTSPASSQAGTVTSYGP----TSSVALGFTSLGPSGPAFVQPLLSAGQA 1971
            ||||||..|  ..|||..|...|.:.|| |..|    .||....|.::...|...||||: |||.
Zfish  2018 ITYVQSTPGVPSPLPLVPSTTGSSSQTV-SAAPGSAYVSSPLATFAAIAHPGQTLVQPLI-AGQP 2080

Human  1972 PLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTS---SAPLAQPSQAPPSLVYTVAT 2033
            .||||.|   ||.|          |..|.|||.|:    ||:   :..:...:...||:||||::
Zfish  2081 SLLAPAQ---SPNP----------PHAPAITAIYT----PTNVTLATGVVSMATVSPSVVYTVSS 2128

Human  2034 STT-------------------------------------------------------------- 2036
            |::                                                              
Zfish  2129 SSSLSPHILPKHTTATSMTPVTLDRQVNVSVHSERQLHQERSLERQHTDSQVYTLSSERQTEKGC 2193

Human  2037 --------------------PPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRP 2081
                                ||:||.:|..|.:||..:.:.::|      |:       ||....
Zfish  2194 LLQLDKHFQVPSKGSGSSVAPPSATSVPLQPGSPAQPSHSGSAP------GT-------PKLITA 2245

Human  2082 SPKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPES-------------ELE 2133
            .|  ||||||.:|:|||||::.|..|:.....|. .:....||.....|             |..
Zfish  2246 RP--PQKVKATLANIPVGSYDGGGRGKEREKDRD-RDKEREREKDKDTSSRFSFEVEKVEKIEKS 2307

Human  2134 GQPTPPAPPPLP-----ETWTPTAR---------------SSPPLPPPAEERTSAKGPETMASKF 2178
            ..|.....|..|     ||..|:.|               .|.|||||     |...|      |
Zfish  2308 NSPAEEGAPETPTHSGVETSAPSGRCKETNAKEVEKKDSHPSSPLPPP-----SGSDP------F 2361

Human  2179 PSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSSGRAAGDTPERKEAAGTGKKVKVR 2243
            ||.|            .|:...||                                   ||||.|
Zfish  2362 PSQS------------HGDKDAPP-----------------------------------KKVKAR 2379

Human  2244 PPPLKKTFDSVD--------NRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYR 2300
            |||||:.|||||        :||||||.|||||||||||||||||||||||||||||||||||||
Zfish  2380 PPPLKRPFDSVDKLVKIFGWHRVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYR 2444

Human  2301 KKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKS-AKCEGDIFTFDRTGTEAEDVLGELEY 2364
            :||||||||||:.|||.|||||.||||||||||||||| ||||||||||||  .:.||:|||||:
Zfish  2445 RKRKNSTDLDSSTEDPISPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDR--PDGEDILGELEF 2507

Human  2365 DKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQ 2429
            |||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||
Zfish  2508 DKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQ 2572

Human  2430 AATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQ 2494
            .|.|:|.  ...:.|.:|.|:|..     |..||.|.||.....:....|.:|  ..|..:|..|
Zfish  2573 TAAPSES--AGISDLSLPGPSGVV-----TLDPALGADPLEKEVEREGEQHSP--EEPRNAGDSQ 2628

Human  2495  2494
            Zfish  2629  2628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CICNP_001291744.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..197 76/386 (20%)
DUF4819 252..346 CDD:465014 40/111 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..325 4/31 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..483 57/242 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 531..579 24/56 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 608..640 25/31 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 658..767 36/110 (33%)
PHA03307 743..>1105 CDD:223039 154/413 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 812..842 13/39 (33%)
dnaA 871..>1046 CDD:455861 82/190 (43%)
Interaction with ATXN1. /evidence=ECO:0000250|UniProtKB:Q924A2 937..955 16/17 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 955..1110 64/155 (41%)
HMG-box_CIC-like 1108..1185 CDD:438806 76/76 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1179..1220 23/40 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1235..1274 19/41 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1290..1347 12/56 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1379..1539 41/159 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1595..1628 10/34 (29%)
PHA03247 <1765..2185 CDD:223021 169/562 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1799..1818 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2064 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2100..2342 123/283 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2430..2517 18/65 (28%)
cicbXP_005173569.3 None

Return to query results.
Submit another query.