DRSC/TRiP Functional Genomics Resources

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Protein Alignment CIC and gei-3

DIOPT Version :10

Sequence 1:NP_001291744.1 Gene:CIC / 23152 HGNCID:14214 Length:2517 Species:Homo sapiens
Sequence 2:NP_001076772.1 Gene:gei-3 / 184597 WormBaseID:WBGene00001560 Length:1405 Species:Caenorhabditis elegans


Alignment Length:1767 Identity:387/1767 - (21%)
Similarity:571/1767 - (32%) Gaps:689/1767 - (38%)


- Green bases have known domain annotations that are detailed below.


Human    79 ELHPGDPAPGPAEDPKGDGEAGR----WEPSLSRKTATFKSRAPKKKYVEEHGAGSSGVAGAPEE 139
            :|.|.:.:..|.  |.|...|.|    :.|.:.|.....||..|.:                |.:
 Worm    42 DLSPTNSSQAPT--PAGPIGAFRFSAFFNPDILRNLNIQKSSPPNQ----------------PSD 88

Human   140 RVRTPEEASGLGVPPRPPTSTRSSSTDTASEHSADLEDEPAEACGPGPWPPG------------- 191
            .|              ||..|...|:||.:|              |.|.|..             
 Worm    89 DV--------------PPPQTSQPSSDTTAE--------------PLPSPAATRIHHPIPVQYNT 125

Human   192 -------STSGSYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRALTFYEGVPGA 249
                   |.:.:..|......|||||...|::.|..|:....::|:.||....|... |:.|...
 Worm   126 DLIAAATSVNSNVILVDWLGHRVLARVPPGVYQPGFVKTAYGNRDIIVQLDDGREAR-YDYVTSE 189

Human   250 G--VDVVLDATPPPG---ALVVGT--AVCTCVEPGVAAYREGVVVEVATKPAAYKVRLSPGPSSQ 307
            .  ..|:.|..|...   .||..|  ||...:|.....||...:......|..:.|:::....| 
 Worm   190 FNLTMVIADQAPSLSDLTTLVSNTILAVRLPLEKSETIYRTAELQSSNGNPPKFMVKVTNANYS- 253

Human   308 PGLPGSLPQPPQPLHREPEEAVWVARSSLRLLRPPW-----EPETMLRKPPT-----------GP 356
                 ||                |:|::||||||||     .|:.:....||           |.
 Worm   254 -----SL----------------VSRANLRLLRPPWYEDLINPQRVSNSVPTSSMSLPSTSEDGR 297

Human   357 EEEQAEPGATL--------------------PPCPAALDPKQPEDAEVSKISFGGNL-------- 393
            :...::...||                    .|.|..:...|    .|:..|..|.:        
 Worm   298 QNTNSQDNVTLLMALQQQQRRSQQLQHVINITPIPTPISTGQ----IVTHASPAGTVIVPVLPLQ 358

Human   394 -GTHCEEGEEKHPPALGTPALLP---------LPPPQLLSPPPKSPAFVGPGRPGEQPSPCQEGS 448
             ||..:|...| ..::.:...||         .|.|..:|.......||.|    .|.|...|..
 Worm   359 PGTSNQESSSK-TVSIDSDEELPESSNQDQSGEPSPTTVSSAASRSLFVNP----SQDSGIFEAD 418

Human   449 QGGSRSSSVASLEKGTAPAARARTPLTAAQQKYKKGDVVCTPSGIRKKFNGKQWRRLCSRDGCMK 513
            ....:||...|:   .||....:..|.  ||::|||::|.|..||||||||||||||||::||.|
 Worm   419 VDTPQSSMFHSI---NAPVCATKAMLD--QQRFKKGEIVTTQCGIRKKFNGKQWRRLCSKEGCNK 478

Human   514 ESQRRGYCSRHLSMRTKEMEG--LADSGPGGAGR-----------PAAVAAREGST--------- 556
            |||||||||||||:::|...|  :....||.:..           |::.|:|..:|         
 Worm   479 ESQRRGYCSRHLSLKSKPPHGHHMERGSPGSSKSDIFHPEPTVFLPSSTASRVPTTVNTAVFSGK 543

Human   557 ----EFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECE--AAVMLVSLGSSRSGTPS 615
                .......|.::.....||.|..:..:::   .|....||..:  ..:::..:...|...|:
 Worm   544 INPLSAPTSLLTDKNLPVQLVAERAHNLQQIL---QLGNVRFDNFQQIQQLLMQHVPQGRRHEPT 605

Human   616 FSPVSTQSPFSPAPS-PSPSPLFGFRPANFSPINASPVIQR--TAVRSRHLSASTPKAGVLTPPD 677
             :.....|.|.|..| |:.|.:|...||.||.:.| |:.|:  .|:..:.::|...         
 Worm   606 -AVSQANSAFCPPISLPNTSSMFNINPALFSQLTA-PLFQQHAQAILQQQINAQNS--------- 659

Human   678 LGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPHPGALGAPGAGGGGAAPDFPKS 742
                                  |||            ...|.|               |.|.|:.
 Worm   660 ----------------------QTN------------NNSLKP---------------AEDEPEE 675

Human   743 DSLD-SGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLLLLPPPAGLTSDPGPSVRRVPAVQ 806
            :..| :|.|:||                                                  ..|
 Worm   676 EDDDGAGSDNVS--------------------------------------------------VCQ 690

Human   807 RDSPVIVRNPDVPLPSKFPGEVGTAGEVRAGGPGRGCRETPVPPGVASGKPGLPPPLPAPVPITV 871
            :...   |:.|              .:..:.|.|.|...|      .|..|.             
 Worm   691 KTEE---RSDD--------------DDDDSSGGGGGLTST------GSSNPN------------- 719

Human   872 PPAAPTAVAQPMPAFGLASSPFQPVAFHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNV 936
                           | :||.||   .|.:                         .|.|.  :||
 Worm   720 ---------------G-SSSNFQ---IHTT-------------------------SRSGE--SNV 738

Human   937 EPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSA 1001
            .|.|                    ....::.||       ||.....||.|.             
 Worm   739 TPTS--------------------GGDQNQNQQ-------SNSRNSSAELAG------------- 763

Human  1002 DPERPPGATCPESPGPGPPHPLGVVESGKGPPPTTEEEASGPPGEPRLDSETESDHDDAFLSIMS 1066
                     |..|      ..|.|..|..|||..        |.:|   |...|..:.||.|   
 Worm   764 ---------CDMS------QELSVETSDAGPPTL--------PSQP---SSIGSSVNSAFRS--- 799

Human  1067 PEIQLPLPPGKRRTQS-----LSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRAL 1126
               .:.:.|.....||     :...|:...|:.|: .||.....:.|:|||||||||||||||.|
 Worm   800 ---PVKIEPNDDYEQSSVKDVMDVKPEVFQSAKER-RRSKVSANEPHVRRPMNAFMIFSKRHRPL 860

Human  1127 VHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAK 1191
            |||::||:||||||||||||||:|...:|.:||.||.|||||||||||||||..|::|       
 Worm   861 VHQQYPNKDNRTVSKILGEWWYSLAADQKAEYHKLATQVKEAHFKAHPDWKWSTKEKK------- 918

Human  1192 PTSLGLAGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAERLHTVGGP 1256
                        .:..|::.|..|..| :.:::.....:|   ||..|                 
 Worm   919 ------------IKSESLNTTPVALTP-LKNKVFDFDIRT---SDDLA----------------- 950

Human  1257 GSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYS--GPKPSTQYGAPGPFAAPGEGGAL 1319
                 ::|       :||    :..|..:|.|..|.:::.  ..:.||| .:...|..|      
 Worm   951 -----KSF-------VDG----TALLSPMTPMTPGASAFRHLSSRDSTQ-SSTSSFDFP------ 992

Human  1320 AATGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERVTDSE 1384
               |.|.:.|:.::.|...||                                       :|.|.
 Worm   993 ---GLPLMSPSLSAISMNTAS---------------------------------------ITSSP 1015

Human  1385 SGDSSGED--------PEGNKG----FGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPVAFGKGY 1437
            :..|:...        .:|..|    |...:.|.::.|| |.||..|          |:     |
 Worm  1016 ALSSATPSFQFDFESLKQGTAGVYPTFNPAMISTLVNSS-TPCRQIL----------PM-----Y 1064

Human  1438 GSAPSSSASSPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFLPM 1502
            .:..||.....||:......:.|...|.|        |:|..:..|   .|.|||...|.:....
 Worm  1065 NTDISSFFLPTASAFRVLNPTISSIIGGF--------SSADTVTTP---LGAPATTMAAMKMSFP 1118

Human  1503 DPATF---RRKRPESVGGLE----PPGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSAP 1560
            :.|:.   .:::.|||..|:    .||.:.:.:|     |:::..::                  
 Worm  1119 ETASMLPQLQEKLESVSFLDQIKIEPGETPLPSP-----NVVRPTII------------------ 1160

Human  1561 APSLAYGAPAAPL---SRPAATMVTNVVRPVS--STPVPIASKPFPTSGRAEASPNDTAGARTEM 1620
             |:..:.||....   ..||...:....||:.  .|.|.:::|.|        ..||....:...
 Worm  1161 -PTAQFLAPTQQFVLQPTPAQLGIRRNKRPLREIDTDVTVSAKLF--------KRNDEQMDKLLA 1216

Human  1621 GTG-----SRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYG 1680
            ..|     :::|..:|    .:|::            :.|.|.|.|..|.|....::.     :|
 Worm  1217 RVGFTEKFAQLPEFTP----KIYNE------------IPASPNLPTPFKTPGQDQSIF-----FG 1260

Human  1681 APAPPAVQFIAQ 1692
            |...|..||:::
 Worm  1261 ANFNPDQQFLSR 1272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CICNP_001291744.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..197 25/141 (18%)
DUF4819 252..346 CDD:465014 26/103 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..325 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..483 37/194 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 531..579 11/73 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 608..640 9/32 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 658..767 14/109 (13%)
PHA03307 743..>1105 CDD:223039 56/367 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 812..842 4/29 (14%)
dnaA 871..>1046 CDD:455861 28/174 (16%)
Interaction with ATXN1. /evidence=ECO:0000250|UniProtKB:Q924A2 937..955 2/17 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 955..1110 31/159 (19%)
HMG-box_CIC-like 1108..1185 CDD:438806 58/76 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1179..1220 6/40 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1235..1274 4/38 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1290..1347 12/58 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1379..1539 39/178 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1595..1628 5/37 (14%)
PHA03247 <1765..2185 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1799..1818
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2039..2064
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2100..2342
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2430..2517
gei-3NP_001076772.1 DUF4819 194..275 CDD:465014 26/102 (25%)
HMG-box_CIC-like 842..918 CDD:438806 58/75 (77%)
Blue background indicates that the domain is not in the aligned region.

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