DRSC/TRiP Functional Genomics Resources

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Protein Alignment ANKLE2 and lem-4

DIOPT Version :10

Sequence 1:NP_055929.1 Gene:ANKLE2 / 23141 HGNCID:29101 Length:938 Species:Homo sapiens
Sequence 2:NP_001023514.1 Gene:lem-4 / 176911 WormBaseID:WBGene00021945 Length:603 Species:Caenorhabditis elegans


Alignment Length:728 Identity:198/728 - (27%)
Similarity:300/728 - (41%) Gaps:177/728 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   173 SKTCSVPPSDTDTYRAGATASKEPPLYYGVCPVYEDVPARNERIYVYENKKEALQAVKMIKG--- 234
            ||..:.|..:|           |.|:|  |....||: .::.| .:|::.||..:.|...:|   
 Worm    22 SKMSNTPVQET-----------EGPVY--VAYSMEDM-LKSPR-DLYKSVKEVAKFVNSAEGKSM 71

Human   235 -SRFKAFSTREDAEKF-ARGICDYFPSPSKTSLPLSPVKTAPLFSNDRLKDGLCLSESETVNKER 297
             :|||.|.|..:|..| |.|..   |:..||..|::|.:....||.              ||:.:
 Worm    72 SARFKKFGTPREAMDFLAYGDA---PTTPKTVPPVAPTEPNSPFSG--------------VNRIQ 119

Human   298 ANSYKNPRTQDLTAKLRKAVEKGEEDTFSDLIWSNPRYLIGS-GDNPTIVQEGCRYNVMHVAAKE 361
            .|.:|            |.||||:.:.|..|:.||||:|:.: ||..:||.||.|||.:|:|||.
 Worm   120 MNEFK------------KYVEKGDMENFLRLVDSNPRFLVNTGGDVASIVMEGFRYNALHIAAKA 172

Human   362 NQASICQLTLDVLENPDFMRLMYPDDDEAMLQKRIRYVVDLYLNTPDKMGYDTPLHFACKFGNAD 426
            .|..|....|::::|.||:..:|....:.:..::|. ::|.|||||||...|||||||.|||...
 Worm   173 GQTEIIAKILELIQNIDFLIRLYGTGADDVTLRKIN-ILDSYLNTPDKGNSDTPLHFASKFGKIG 236

Human   427 VVNVLSSHHLIVKNSRNKYDKTPEDVICERSKNKSVELKER-IREYLKGHYYVPLLRAEETSSPV 490
            ||.||:.:....:...||..|:..|...||...:..::.:| |...::| :||.|.|...|.|..
 Worm   237 VVRVLTENSATDRTLLNKSGKSALDCAGERYTGEDKDMVQRDIHLAIEG-FYVFLHRNPTTGSTQ 300

Human   491 IGELWSPDQTAEASHVSRYGGSPRDPVLTLRAFAGP-LSPAKAEDFRKLWKTPPREKAGFLHHVK 554
            :.....|..|        |..||....:|:.|.||| .:..:|.||.|.|:|..:|       :|
 Worm   301 LTVSQKPPAT--------YSTSPTTATVTVSAQAGPFFTEREARDFAKSWQTAGKE-------LK 350

Human   555 KSDPERGFERVGRELAHELGYPWVEYWEFLGC--FVDLSSQEGLQRLEEYLTQQEIGKKAQQETG 617
            ::|.::|:|||||.||.:....|.|.|.|||.  .:||.|::||..||.:|.::..|.....|  
 Worm   351 RTDFDKGWERVGRVLAEQSEAMWRETWHFLGSMELLDLGSEQGLGVLEAFLREKRRGNLRNSE-- 413

Human   618 EREASCRDKATTSGSNSISVRAFLDEDDMSLEEIKNRQNAARNNSPPTVGAFGHTRCSAFPL--- 679
                                          :.||..:::..|...        |.|...|.:   
 Worm   414 ------------------------------ISEISTKKSIFRRGI--------HARKLDFGILDG 440

Human   680 EQEADLIEAAEPGGPHSSRNGLCHPLNHSRTLAGKRPKAPRGEEAHLPPVSDLTVEFDKLNLQNI 744
            |:.|::.|...|.|..|:.:                             ..|..:.:|  ....|
 Worm   441 EKSAEISENLTPDGSDSADD-----------------------------EDDDDIFYD--TFSEI 474

Human   745 GRSVSKT---PDESTKTKDQILTSRINAVE-RDLLEPSPADQLGNGHRRTESEMSARIAKMSLSP 805
            ..:..|:   ||::..:    ||.|..|:. ...|.|.|..|..|......||.....|   ..|
 Worm   475 PAAAEKSINDPDDTLGS----LTDRFAAISIFSPLPPPPPPQWSNSPNFDYSEGEDSFA---TPP 532

Human   806 SSPRHEDQLEVTREPARRLFLFGEEPSKLDQDVLAALECADVDPH---QFPAVHRWKSAVLCYSP 867
            ::|          .|.   |:..:||.|:|.|:...|  |.:...   :||....:...:...:.
 Worm   533 TTP----------PPT---FVADDEPCKIDNDLFEVL--AQISSELISKFPLTQDYVQKLGKLTA 582

Human   868 SDRQSW---PSPA 877
            .||.:|   .|||
 Worm   583 HDRSTWRPIDSPA 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ANKLE2NP_055929.1 LEM_ANKL2 71..113 CDD:240591
Cauli_VI 199..249 CDD:460297 16/53 (30%)
ANKYR <303..467 CDD:440430 61/164 (37%)
ANK repeat 355..386 CDD:293786 11/30 (37%)
ANK repeat 410..443 CDD:293786 14/32 (44%)
ANK 411..440 14/28 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 609..636 2/26 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 870..924 5/11 (45%)
lem-4NP_001023514.1 ANKYR <144..270 CDD:440430 51/126 (40%)
ANK repeat 165..218 CDD:293786 17/53 (32%)
ANK repeat 220..253 CDD:293786 14/32 (44%)
Blue background indicates that the domain is not in the aligned region.

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