DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FLII and flii

DIOPT Version :10

Sequence 1:XP_005256612.1 Gene:FLII / 2314 HGNCID:3750 Length:1296 Species:Homo sapiens
Sequence 2:NP_001015848.1 Gene:flii / 548565 XenbaseID:XB-GENE-478681 Length:1270 Species:Xenopus tropicalis


Alignment Length:1296 Identity:1060/1296 - (81%)
Similarity:1170/1296 - (90%) Gaps:32/1296 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEATGVLPFVRGVDLSGNDFKGGYFPENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSH 65
            |.|||||||:|||||||||||||||||:||:|:|||||||||||||||||||::|.|||||||||
 Frog     1 MAATGVLPFIRGVDLSGNDFKGGYFPEHVKSMSSLRWLKLNRTGLCYLPEELSSLHKLEHLSVSH 65

Human    66 NNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECPRELENAKNML 130
            |:||||||||||||.|||||||||||||||:|||||:||||||||||:|||||||||||||||||
 Frog    66 NSLTTLHGELSSLPCLRAIVARANSLKNSGIPDDIFQLDDLSVLDLSYNQLTECPRELENAKNML 130

Human   131 VLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLP 195
            ||||||||||.||||||||||||:|||||:|:|:|||||||||||||||:||.||||||||||||
 Frog   131 VLNLSHNSIDNIPNQLFINLTDLIYLDLSDNKLDSLPPQMRRLVHLQTLILNNNPLLHAQLRQLP 195

Human   196 AMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPSLRRLNLSSNQITE 260
            |||||||||||:|||||||:|||||.|:.|:|||||.|::||:|||||||.||:|||||||||:|
 Frog   196 AMTALQTLHLRNTQRTQSNMPTSLEVLTCLSDVDLSMNEMTRIPECLYTLASLKRLNLSSNQISE 260

Human   261 LSLCIDQWVHVETLNLSRNQLTSLPSAICKLSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMAA 325
            :|||||||..:|||||:||||||||||||||:|||||||||||:||||:|||||||:|||.||||
 Frog   261 ISLCIDQWAQLETLNLARNQLTSLPSAICKLAKLKKLYLNSNKMDFDGIPSGIGKLSNLEVFMAA 325

Human   326 NNNLELVPESLCRCPKLRKLVLNKNHLVTLPEAIHFLTEIEVLDVRENPNLVMPPKPADRAAEWY 390
            ||||||:|||||||.||||||||||.|||||||:||||::|||||||||:||||||||||.:|:|
 Frog   326 NNNLELIPESLCRCSKLRKLVLNKNRLVTLPEAVHFLTDLEVLDVRENPSLVMPPKPADRTSEFY 390

Human   391 NIDFSLQNQLRLAGASPATVAAAAAA-GSGPKDPMARKMRLRRRKDSAQDDQAKQVLKGMSDVAQ 454
            |||||||||||||||||||||||||| ||..|||.|||||||||||::||||||||||||||||:
 Frog   391 NIDFSLQNQLRLAGASPATVAAAAAAGGSATKDPSARKMRLRRRKDTSQDDQAKQVLKGMSDVAE 455

Human   455 EKNKKQEESADARAPSGKVRRWDQGLEKPRLDYSEFFTEDVGQLPGLTIWQIENFVPVLVEEAFH 519
            |||||.:|:.|.:....|.||||||||||.|||||||||||||:||:|:||||||:|..|:|.||
 Frog   456 EKNKKIQENGDMKYTDLKARRWDQGLEKPHLDYSEFFTEDVGQIPGVTVWQIENFIPTQVDETFH 520

Human   520 GKFYEADCYIVLKTFLDDSGSLNWEIYYWIGGEATLDKKACSAIHAVNLRNYLGAECRTVREEMG 584
            |:||||||||||||:||.:|:|:||||||||.||||||||||||||||||||||||.||:|||||
 Frog   521 GRFYEADCYIVLKTYLDSNGALHWEIYYWIGQEATLDKKACSAIHAVNLRNYLGAEGRTIREEMG 585

Human   585 DESEEFLQVFDNDISYIEGGTASGFYTVEDTHYVTRMYRVYGKKNIKLEPVPLKGTSLDPRFVFL 649
            ||||||.|||.||||||||||||||||||||.|:||:||:||||||:|||:|||.:|||||||||
 Frog   586 DESEEFSQVFYNDISYIEGGTASGFYTVEDTQYITRLYRIYGKKNIRLEPMPLKSSSLDPRFVFL 650

Human   650 LDRGLDIYVWRGAQATLSSTTKARLFAEKINKNERKGKAEITLLVQGQELPEFWEALGGEPSEIK 714
            ||.|:|||||||:|||||:||||||||||||||||||||||.||....|..||||.|||:|.|:|
 Frog   651 LDHGMDIYVWRGSQATLSNTTKARLFAEKINKNERKGKAEIILLTHEMETAEFWELLGGQPEELK 715

Human   715 KHVPEDFWPPQPKLYKVGLGLGYLELPQINYKLSVEHKQRPKVELMPRMRLLQSLLDTRCVYILD 779
            ..||:||.||:|||||||||||||||||||||:|||||:|||:||||.||||.:||||:.|||||
 Frog   716 PCVPDDFQPPRPKLYKVGLGLGYLELPQINYKISVEHKKRPKIELMPEMRLLHTLLDTKSVYILD 780

Human   780 CWSDVFIWLGRKSPRLVRAAALKLGQELCGMLHRPRHATVSRSLEGTEAQVFKAKFKNWDDVLTV 844
            |.||:|||:||||.|||||||||||||||.|||||:||.|.|:|||||.||||:||:||||||.|
 Frog   781 CHSDIFIWIGRKSSRLVRAAALKLGQELCSMLHRPKHAMVIRNLEGTECQVFKSKFRNWDDVLKV 845

Human   845 DYTRNAEAVLQSPGLSGKVKRDAEKKDQMKADLTALFLPRQPPMSLAEAEQLMEEWNEDLDGMEG 909
            |||||||:|:|..||:||||:||| |||||||||||||||||||.::|||||.||||||||||||
 Frog   846 DYTRNAESVVQGGGLTGKVKKDAE-KDQMKADLTALFLPRQPPMPISEAEQLTEEWNEDLDGMEG 909

Human   910 FVLEGKKFARLPEEEFGHFYTQDCYVFLCRYWVPVEYEEEEKKEDKEEKAEGKEGEEATAE--AE 972
            |||||||||||||||||||.||||||||||||:|:|.:|||:::.|:.|..| :|||...|  .|
 Frog   910 FVLEGKKFARLPEEEFGHFNTQDCYVFLCRYWIPIEQDEEEEQKSKKRKIHG-DGEEDEDEEDEE 973

Human   973 EKQPEEDFQCIVYFWQGREASNMGWLTFTFSLQKKFESLFPGKLEVVRMTQQQENPKFLSHFKRK 1037
            :|||||||||:||||||||||||||||||||||||||||||||||||||||||||.|||||||||
 Frog   974 DKQPEEDFQCVVYFWQGREASNMGWLTFTFSLQKKFESLFPGKLEVVRMTQQQENAKFLSHFKRK 1038

Human  1038 FIIHRGKRKAVQGAQQPSLYQIRTNGSALCTRCIQINTDSSLLNSEFCFILKVPFESEDNQGIVY 1102
            ||||:||||:.....|||||.:|||||||||||||||||.|||||||||||||||||.|||||||
 Frog  1039 FIIHKGKRKSKDVGLQPSLYHVRTNGSALCTRCIQINTDCSLLNSEFCFILKVPFESIDNQGIVY 1103

Human  1103 AWVGRASDPDEAKLAEDILNTMFDTSYSKQVINEGEEPENFFWVGIGAQKPYDDDAEYMKHTRLF 1167
            .|||||:|||||||:|||:|.|||.:|||||||||||||||||||||.||.||:||:||||.|||
 Frog  1104 TWVGRAADPDEAKLSEDIMNHMFDDTYSKQVINEGEEPENFFWVGIGGQKAYDEDADYMKHARLF 1168

Human  1168 RCSNEKGYFAVTEKCSDFCQDDLADDDIMLLDNGQEVYMWVGTQTSQVEIKLSLKACQVIWVEGG 1232
            |||||||||:|:||||||||||||||||||||||:|||||||||||||||||||||         
 Frog  1169 RCSNEKGYFSVSEKCSDFCQDDLADDDIMLLDNGKEVYMWVGTQTSQVEIKLSLKA--------- 1224

Human  1233 PRWACGQGRVITQGSLSPCQVYIQHMRSKEHERPRRLRLVRKGNEQHAFTRCFHAWSAFCK 1293
                              |||||||||:|:.|.||:|||||||||.||||||||||.||.|
 Frog  1225 ------------------CQVYIQHMRAKDAEHPRKLRLVRKGNEPHAFTRCFHAWGAFRK 1267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FLIIXP_005256612.1 leucine-rich repeat 10..34 CDD:275380 20/23 (87%)
LRR <24..375 CDD:443914 303/350 (87%)
leucine-rich repeat 35..57 CDD:275380 19/21 (90%)
leucine-rich repeat 58..80 CDD:275380 20/21 (95%)
leucine-rich repeat 83..105 CDD:275378 19/21 (90%)
leucine-rich repeat 106..128 CDD:275380 20/21 (95%)
leucine-rich repeat 129..152 CDD:275380 21/22 (95%)
leucine-rich repeat 153..175 CDD:275380 17/21 (81%)
leucine-rich repeat 176..199 CDD:275380 20/22 (91%)
leucine-rich repeat 200..224 CDD:275380 20/23 (87%)
leucine-rich repeat 225..247 CDD:275380 16/21 (76%)
leucine-rich repeat 248..270 CDD:275380 18/21 (86%)
leucine-rich repeat 271..293 CDD:275380 19/21 (90%)
leucine-rich repeat 294..318 CDD:275380 21/23 (91%)
leucine-rich repeat 319..339 CDD:275380 17/19 (89%)
leucine-rich repeat 342..355 CDD:275378 11/12 (92%)
gelsolin_S1_like 492..604 CDD:200446 92/111 (83%)
gelsolin_like 619..706 CDD:200436 69/86 (80%)
gelsolin_S3_like 723..837 CDD:200448 93/113 (82%)
gelsolin_like <974..1034 CDD:200436 57/59 (97%)
gelsolin_S5_like 1053..1152 CDD:200444 86/98 (88%)
gelsolin_S6_like 1163..1289 CDD:200447 88/125 (70%)
fliiNP_001015848.1 PPP1R42 <10..163 CDD:455733 137/152 (90%)
leucine-rich repeat 10..34 CDD:275380 20/23 (87%)
leucine-rich repeat 35..57 CDD:275380 19/21 (90%)
leucine-rich repeat 58..80 CDD:275380 20/21 (95%)
leucine-rich repeat 81..105 CDD:275380 21/23 (91%)
LRR 105..>374 CDD:443914 231/268 (86%)
leucine-rich repeat 106..128 CDD:275380 20/21 (95%)
leucine-rich repeat 129..152 CDD:275380 21/22 (95%)
leucine-rich repeat 153..175 CDD:275380 17/21 (81%)
leucine-rich repeat 176..199 CDD:275380 20/22 (91%)
leucine-rich repeat 200..224 CDD:275380 20/23 (87%)
leucine-rich repeat 225..247 CDD:275380 16/21 (76%)
leucine-rich repeat 248..270 CDD:275380 18/21 (86%)
leucine-rich repeat 271..318 CDD:275380 41/46 (89%)
leucine-rich repeat 319..341 CDD:275380 19/21 (90%)
gelsolin_S1_like 493..605 CDD:200446 92/111 (83%)
gelsolin_like 620..707 CDD:200436 69/86 (80%)
gelsolin_S3_like 724..838 CDD:200448 93/113 (82%)
gelsolin_like 932..1035 CDD:200436 80/103 (78%)
gelsolin_S5_like 1054..1153 CDD:200444 86/98 (88%)
gelsolin_S6_like 1164..1262 CDD:200447 87/124 (70%)

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