Sequence 1: | NP_001309182.1 | Gene: | RAD54L2 / 23132 | HGNCID: | 29123 | Length: | 1467 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_012140.1 | Gene: | STH1 / 854680 | SGDID: | S000001388 | Length: | 1359 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1362 | Identity: | 303/1362 - (22%) |
---|---|---|---|
Similarity: | 503/1362 - (36%) | Gaps: | 445/1362 - (32%) |
- Green bases have known domain annotations that are detailed below.
Human 10 DPDLDPDVELEDAEEEEEEEEV-------AVEEC----DRDDEEDLLDDPSLEGMCGTEHAQLGE 63
Human 64 DGQQPPRCTSTTSSQSEPSEQLRRHQGKNLASEDPKKKRAQKPSHMRRNIRKLLREDQLEPVTKA 128
Human 129 AQQ-----------------EELERRKRLEQQRKD---YAAPIPTVPLEFLPEEIA--------- 164
Human 165 -----LRAS-------DGPQLPPRVLAQEVICLDSSSGS------EDEKSSR------------D 199
Human 200 EVIELSSGEEDTLHIVDSSESVSEDDEEEEKGGTHVNDVLNQRDALGRVLVNLNHPPEEENVFLA 264
Human 265 PQLARAVKPHQIGGIRF---LYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVLFRHT 326
Human 327 PAKTV---LAIVPVNTLQNWLAEFNMWLPPPEALPADNKPEEVQPRFFKVHILNDEHKTMASRAK 388
Human 389 VMADWVSEGGVLLMGYEMY---RLLTLKKSFATGRPKKTKKRSHPVIIDLDEEDRQQEFRREFEK 450
Human 451 ALCRPGPDVVICDEGHRIKNCQASTSQALKN-IRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFL 514
Human 515 GTRQEFSNMFERPILN---GQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEE 576
Human 577 NVILVRLSKIQRDLYTQFMDR---FRDCGSSGWL-----GLN----PLKAFCVCCKIWNHPDVLY 629
Human 630 EALQKESLANEQDLDVEELGSAGTSARCPPQGTKGKGEDSTLASSMGEATNSKFLQGVGFNPFQE 694
Human 695 RGNNIVTYEWAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGK 759
Human 760 REVPCPPGTEGQGAQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVN 824
Human 825 LIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVV 889
Human 890 --------------------------------------DDLNPMLNFTRKEVENLL-HFVEKEPA 915
Human 916 PQVSLNVK--GIKESVLQLACL-KYPHLITKEPFEHESLLLNRKDHK-LTKAEKKAAKKSYEEDK 976
Human 977 RTSVPYTRPSYAQYYPA-SDQSLTSIPAFSQR---NWQPTLKGDEKPVASVRPVQSTPIPMMPRH 1037
Human 1038 VPLGGSVSSA--SSTNPSMNFPINYLQRAGVLVQK---VVTTTDIVIPGLNSSTDVQARINAG-- 1095
Human 1096 -------ESIHIIRGT----------------KGTYIRTSDGRIFAVRATGKPKVPEDGRMAASG 1137
Human 1138 SQGPSCESTSNGRHSASSPKAPDPEGLARPVSPDSPEIISELQQYADVAAARESRQSSPSTN 1199 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RAD54L2 | NP_001309182.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..150 | 34/170 (20%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 186..234 | 12/65 (18%) | |||
SNF2_N | 274..628 | CDD:278600 | 105/378 (28%) | ||
DEXDc | 300..492 | CDD:238005 | 51/198 (26%) | ||
DEAH box | 463..466 | 2/2 (100%) | |||
LXXLL motif 1 | 551..555 | 2/3 (67%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 649..673 | 0/23 (0%) | |||
Helicase_C | 720..854 | CDD:278689 | 47/133 (35%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1120..1171 | 9/50 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1184..1221 | 4/16 (25%) | |||
DEPP | <1192..1278 | CDD:291988 | 3/8 (38%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1247..1284 | ||||
LXXLL motif 2 | 1329..1333 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1445..1467 | ||||
STH1 | NP_012140.1 | HSA | 314..382 | CDD:400077 | 11/68 (16%) |
PLN03142 | 370..>955 | CDD:215601 | 196/772 (25%) | ||
SnAC | 1006..1069 | CDD:405324 | 15/76 (20%) | ||
COG5076 | <1211..>1359 | CDD:227408 | 19/96 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |