DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NFASC and Cont

DIOPT Version :10

Sequence 1:XP_011507618.2 Gene:NFASC / 23114 HGNCID:29866 Length:1466 Species:Homo sapiens
Sequence 2:NP_649461.2 Gene:Cont / 40553 FlyBaseID:FBgn0037240 Length:1390 Species:Drosophila melanogaster


Alignment Length:1104 Identity:263/1104 - (23%)
Similarity:446/1104 - (40%) Gaps:199/1104 - (18%)


- Green bases have known domain annotations that are detailed below.


Human   121 LSLGGAIEIPMDPSIQNELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFN 185
            |.:.....||..|..   :.||...|....|:.::   :::.:.|.|.|.|.||:.|.|     .
  Fly   350 LDINDMERIPRGPYF---VKQPNDTTFDVNKNRLI---NDVTLSCLANGYPTPSYTWYR-----E 403

Human   186 IAKDPRVSMRR-----------RSGTLVIDFRSGGRPEEY--EGEYQCFARNKFGTALS------ 231
            :..|.|:..::           ..|.|:|     ..|::.  :|.|.|.|.||||...|      
  Fly   404 VYVDDRLEYQKIDPLAQDRYTISGGNLII-----YEPKQALDQGAYHCVAENKFGRIRSESAHLN 463

Human   232 -------NRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEP-ITQD 288
                   |..|...:....|.|              ::.|:||...|....:|....... :.:|
  Fly   464 FGFIMEFNLKRSAETSEMNWGK--------------SIFCDPPQHYPDVRYYWARDYFPNFVEED 514

Human   289 KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRN-HPDM 352
            :||....:|.||||.:...| :.:|||..:...:.|.:....|.|:|..|..|......| .|.:
  Fly   515 QRVFVSRDGALYFSFIETVD-RANYSCTVQTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKV 578

Human   353 YSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFE-NF 416
            :....||                    |.::.|||:|.|.|.|...|.::|  ||..:..:. |:
  Fly   579 FPEAPVA--------------------GDEIRLECMAFGYPIPSYNWTRQG--LPLQRNAYTINY 621

Human   417 NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANG 481
            .:.|.|.|.:..|:|||.|..:|...::..:|.:.::..|.:....|::|.....|...:|.|..
  Fly   622 GRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQFTIPLKDMIKDYNSDVTFICEAFA 686

Human   482 NPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCNTSNEHGYLLA 538
            .|.....|..|.|.|.  |.|.||    |..|.:|..::.:        |:|||...|:.....:
  Fly   687 IPDANYTWYKNAERLD--PANINR----DRYIIQDNVLTIKFLEKDKDDAMYQCGAQNQLKTSFS 745

Human   539 NAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVY 600
            :|.:.||.:.|.... |....:..:....|.:.|....:|.|..:|.|:||  ||   ||:..:.
  Fly   746 SAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGS---GGHRRIL 807

Human   601 ENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQ-VARRGTTVQLECRV 664
            .:|:|.|....::|:|||||:|:|..|..|:..|:.|....|....|..: |::....:.|.|..
  Fly   808 PSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEA 872

Human   665 KHDPSLKLTVSWLKDDEPLYIGN----RMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAY 725
            ..|..|.:...|..:.|.|...:    |:..:.:.||:...:.||.|.|.||..:.:::..:|..
  Fly   873 AFDELLDIAYVWKHNGEVLKNNHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTS 937

Human   726 LTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQ 790
            :::               :|.|..|..:::..:::....:.|:.|..|...|..|.:....:   
  Fly   938 VSI---------------EGAPGAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTN--- 984

Human   791 PGVWH-------------DHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTS 842
               |:             :..:|.....:.|:.|:|:..|:|.|.|:|::|...||.||..|.|.
  Fly   985 ---WNRTWVNVSTHVQAREVDRYTSRQQAEVVNLTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTY 1046

Human   843 GAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYV- 906
            ...|...|.:|.|.|.:..::.|||.|:.........:.|.|.|:.:...|       |.|..: 
  Fly  1047 EDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIE-------WASDEIK 1104

Human   907 ----VGQTPVYVP-------YEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTA 960
                :|...|.:|       ||::|||.|..|||||.|..:.:|.||.|:.||.:......|||.
  Fly  1105 KQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTC 1169

Human   961 ISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR--GVVSRLFPYS 1021
            .::.|..:  ..:.::|:|..:|..||:.:        .|:.....:.....|  .::..|.|.:
  Fly  1170 FNVTWQPIDMSRENIRGKLIGHRLKYWKTT--------HQEEDSVYYLSRTTRNWALIVGLQPDT 1226

Human  1022 NYKLEMVVVNGRGDGPRSETKEFTT----PEGVPSAPRRFRVRQPNLETINLEWDH--PEHPNGI 1080
            .|.::::..|..|:||.||..|..|    |:..||:...:.:   |..|:.:.|.:  |......
  Fly  1227 YYFVKVMAYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGI---NPSTVRVVWRYVSPSQDEEP 1288

Human  1081 MIGYTLK-------YVAFNGT--KVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSG 1135
            :.||.::       .:..|.|  .:|::: |::..|.|        |...|...:.|.:..|.|
  Fly  1289 VEGYKVRIWESDQNMITANNTIVPIGQKL-ESYINNLT--------PGKSYNMRVLAYSNGGDG 1343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NFASCXP_011507618.2 IgI_hNeurofascin_like 143..237 CDD:409459 27/119 (23%)
Ig strand A 143..147 CDD:409459 0/3 (0%)
Ig strand A' 152..156 CDD:409459 0/3 (0%)
Ig strand B 161..168 CDD:409459 1/6 (17%)
Ig strand C 174..179 CDD:409459 2/4 (50%)
Ig strand C' 182..184 CDD:409459 0/1 (0%)
Ig strand D 191..194 CDD:409459 1/2 (50%)
Ig strand E 199..203 CDD:409459 2/3 (67%)
Ig strand F 216..224 CDD:409459 4/7 (57%)
Ig strand G 227..237 CDD:409459 4/22 (18%)
IgI_2_L1-CAM_like 246..336 CDD:409432 21/90 (23%)
Ig strand A 246..249 CDD:409432 1/2 (50%)
Ig strand A' 251..255 CDD:409432 0/3 (0%)
Ig strand B 258..266 CDD:409432 1/7 (14%)
Ig strand C 273..279 CDD:409432 1/5 (20%)
Ig strand C' 282..285 CDD:409432 0/3 (0%)
Ig strand D 291..295 CDD:409432 1/3 (33%)
Ig strand E 297..301 CDD:409432 2/3 (67%)
Ig strand F 312..320 CDD:409432 3/7 (43%)
Ig strand G 323..336 CDD:409432 3/12 (25%)
Ig3_L1-CAM_like 371..453 CDD:409394 23/82 (28%)
Ig strand B 383..387 CDD:409394 1/3 (33%)
Ig strand C 396..400 CDD:409394 0/3 (0%)
Ig strand E 418..422 CDD:409394 1/3 (33%)
Ig strand F 432..437 CDD:409394 3/4 (75%)
Ig strand G 445..448 CDD:409394 0/2 (0%)
Ig 457..545 CDD:472250 23/95 (24%)
Ig strand B 473..477 CDD:409353 0/3 (0%)
Ig strand C 486..490 CDD:409353 0/3 (0%)
Ig strand E 510..514 CDD:409353 1/3 (33%)
Ig strand F 524..529 CDD:409353 3/4 (75%)
Ig strand G 537..540 CDD:409353 0/2 (0%)
Ig <569..637 CDD:472250 25/69 (36%)
Ig strand C 580..584 CDD:409353 0/3 (0%)
Ig strand E 603..607 CDD:409353 2/3 (67%)
Ig strand F 617..622 CDD:409353 4/4 (100%)
Ig strand G 630..633 CDD:409353 1/2 (50%)
I-set 647..728 CDD:400151 19/85 (22%)
Ig strand B 658..662 CDD:409353 1/3 (33%)
Ig strand C 673..677 CDD:409353 0/3 (0%)
Ig strand E 694..698 CDD:409353 1/3 (33%)
Ig strand F 708..713 CDD:409353 2/4 (50%)
FN3 721..>989 CDD:442628 71/294 (24%)
Ig strand G 721..724 CDD:409353 0/2 (0%)
FN3 747..837 CDD:238020 21/102 (21%)
FN3 947..1046 CDD:238020 23/102 (23%)
FN3 1051..1142 CDD:238020 19/96 (20%)
fn3 1240..1312 CDD:394996
Bravo_FIGEY 1358..1442 CDD:464016
ContNP_649461.2 CLECT 139..>223 CDD:214480
Ig 361..466 CDD:472250 28/120 (23%)
Ig strand B 384..388 CDD:409356 0/3 (0%)
Ig strand C 397..409 CDD:409356 4/16 (25%)
Ig strand E 428..432 CDD:409356 2/3 (67%)
Ig strand F 443..448 CDD:409356 2/4 (50%)
Ig strand G 457..460 CDD:409356 1/2 (50%)
Ig 474..559 CDD:472250 22/99 (22%)
Ig strand B 485..489 CDD:409392 1/17 (6%)
Ig strand C 499..503 CDD:409392 0/3 (0%)
Ig strand E 523..527 CDD:409392 2/3 (67%)
Ig strand F 537..542 CDD:409392 3/4 (75%)
Ig strand G 553..556 CDD:409392 0/2 (0%)
Ig_3 584..644 CDD:464046 23/81 (28%)
Ig_3 660..738 CDD:464046 22/83 (27%)
Ig 756..844 CDD:472250 28/90 (31%)
Ig strand B 775..779 CDD:409358 1/3 (33%)
Ig strand C 788..792 CDD:409358 0/3 (0%)
Ig strand E 810..814 CDD:409358 2/3 (67%)
Ig strand F 824..829 CDD:409358 4/4 (100%)
Ig strand G 837..840 CDD:409358 1/2 (50%)
Ig <868..944 CDD:472250 18/90 (20%)
Ig strand C 881..885 CDD:409359 0/3 (0%)
Ig strand E 906..910 CDD:409359 1/3 (33%)
Ig strand F 920..925 CDD:409359 2/4 (50%)
Ig strand G 933..936 CDD:409359 0/2 (0%)
FN3 944..1043 CDD:238020 22/104 (21%)
FN3 1053..1146 CDD:238020 29/99 (29%)
fn3 1156..1244 CDD:394996 20/95 (21%)
fn3 1259..1346 CDD:394996 19/97 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.