DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPART and spartb

DIOPT Version :10

Sequence 1:NP_055902.1 Gene:SPART / 23111 HGNCID:18514 Length:666 Species:Homo sapiens
Sequence 2:NP_001038916.1 Gene:spartb / 751741 ZFINID:ZDB-GENE-060825-146 Length:269 Species:Danio rerio


Alignment Length:289 Identity:141/289 - (48%)
Similarity:174/289 - (60%) Gaps:24/289 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEQEPQNG-EPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKES 64
            |||..|:. :.|.:::|::.|:|||..:|||||.||.|.||||...|:||..||||.||:.|:..
Zfish     1 MEQAKQDRFDHARLQVIKDGYEKAFECINKGLNEDEAGHKEEALKLYQQGRQHLLRAISVPSQGV 65

Human    65 EHTGPGWESARQMQQKMKETLQNVRTRLEILEKGLA-TSLQNDLQEVPKLYPEFPPKDMCEKLPE 128
            |..||.||||||||.||:|||.|:.|||.|||...| ..:.|......|||||. ||.|.::...
Zfish    66 ECVGPSWESARQMQHKMQETLSNITTRLAILETTPAPNEVSNGTAAAQKLYPEV-PKVMPQRPTP 129

Human   129 PQSFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPPAYTPQAAEGHYTVSYGTDSGE 193
            ||:         :||..:..|.|..:....   |:..|  |.|||||||||:||.|:||||||||
Zfish   130 PQT---------INGRVAGASGGQTSPTVQ---PNILC--EQPPAYTPQAADGHLTISYGTDSGE 180

Human   194 FSSVGEEFYRNHSQPPPL-ETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNS 257
            ...||:|||...|...|. .:||.|.:||..:|.|||||||.|.|.|||||||||||||:|....
Zfish   181 LPVVGDEFYSQTSNSTPAGSSLGEDGEELFFLPQGVQIFFVTPEGHVSAPSYPGYLRIVKFTSEH 245

Human   258 LDTVLNRPPGFLQVCDWLYPLVPDRSPVL 286
            .:.:.||||.||||      .:..:||.|
Zfish   246 SERIPNRPPAFLQV------RIYKKSPCL 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARTNP_055902.1 MIT_spastin 16..95 CDD:239142 47/78 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..156 6/31 (19%)
Ubiquitin-binding region (UBR) domain. /evidence=ECO:0000269|PubMed:37443287 190..380 51/98 (52%)
LC3-interacting region (LIR), mediates interaction with MAP1LC3A AND MAP1LC3C. /evidence=ECO:0000269|PubMed:37443287 193..200 3/6 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..398
Senescence 427..617 CDD:462037
Required for localization to lipid droplets. /evidence=ECO:0000269|PubMed:37443287 431..503
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..666
spartbNP_001038916.1 MIT_spastin 17..96 CDD:239142 47/78 (60%)
Blue background indicates that the domain is not in the aligned region.

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