DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPART and Spart

DIOPT Version :9

Sequence 1:NP_001135766.1 Gene:SPART / 23111 HGNCID:18514 Length:666 Species:Homo sapiens
Sequence 2:XP_006232427.2 Gene:Spart / 295053 RGDID:1305900 Length:685 Species:Rattus norvegicus


Alignment Length:682 Identity:571/682 - (83%)
Similarity:611/682 - (89%) Gaps:24/682 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEQEPQNGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESE 65
            ||:..:||||.|:|||:|||:|||:||||||||||||||||||.|||||||||||||||::.|..
  Rat    12 MERGAENGEPPEMKIIKEAYEKAFMFVNKGLNTDELGQKEEAKTYYKQGIGHLLRGISIAAAEPG 76

Human    66 HTGPGWESARQMQQKMKETLQNVRTRLEILEKGLATSLQNDLQEVPKLYPEFPPKDMCEKLPEPQ 130
            ||||.||:||||||||||||||||||||||||||||||:||||:|||||||||||..|:|.||.:
  Rat    77 HTGPAWEAARQMQQKMKETLQNVRTRLEILEKGLATSLRNDLQDVPKLYPEFPPKGTCKKSPEAE 141

Human   131 SFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPPAYTPQAAEGHYTVSYGTDSGEFS 195
               ||||||||:|:.|...||..|||::|.|||..||||||||||||||||||||||||||||||
  Rat   142 ---SAPQHAEVDGSASAAGAGPSAAPSALPLPSPGCPAEAPPAYTPQAAEGHYTVSYGTDSGEFS 203

Human   196 SVGEEFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDT 260
            ||||:||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   204 SVGEDFYRNRSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDT 268

Human   261 VLNRPPGFLQVCDWLYPLVPDRSPVLKCTAGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFED 325
            |||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
  Rat   269 VLNRPPGFLQVCDWLYPLVPDRSPVLKCTVGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFED 333

Human   326 LLRQMSDLRLQANWNR------AEEENEFQIPGRTRPSSDQLKEASGTDVKQ-------LDQGNK 377
            ||||||||||||||||      .|||:|||||||.:   :..||||||||:|       :|||:|
  Rat   334 LLRQMSDLRLQANWNREEEEEEEEEEDEFQIPGRVK---ELPKEASGTDVRQSSSSGSSIDQGSK 395

Human   378 DVRHKGKRGKRAKDTSSEEVNLSHIVPCEPVPEEKPKELPEWSEKVAHNILSGASWVSWGLVKGA 442
            |.||||||||:.||:|||||||..||||||..|||.|:|||||||||||||||||||||||||||
  Rat   396 DARHKGKRGKKTKDSSSEEVNLRQIVPCEPSSEEKSKDLPEWSEKVAHNILSGASWVSWGLVKGA 460

Human   443 EITGKAIQKGASKLRERIQPEEKPVEVSPAVTKGLYIAKQATGGAAKVSQFLVDGVCTVANCVGK 507
            |.||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||
  Rat   461 EFTGKAIQKGASKLRERIQPEEKPVEVSPAVTRGLYIAKQATGGAAKVSQFLVDGVCTVANCVGK 525

Human   508 ELAPHVKKHGSKLVPESLKKDKDGKSPLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETV 572
            |||||||||||||||||||:||||||.||||||||||||||||||||||||||||||||||||||
  Rat   526 ELAPHVKKHGSKLVPESLKRDKDGKSTLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETV 590

Human   573 QTVRYKYGYNAGEATHHAVDSAVNVGVTAYNINNIGIKAMVKKTATQTGHTLLEDYQIVDNSQRE 637
            ||||||||:|||||||:|||||:|||||||||:||||||||||||.||||||||||||:::.|||
  Rat   591 QTVRYKYGHNAGEATHNAVDSAINVGVTAYNIDNIGIKAMVKKTAKQTGHTLLEDYQIIESPQRE 655

Human   638 NQEGAANVNVRGEKDEQTK---EVKEAKKKDK 666
            :|.||  .:..|.:|.:.|   |.|.||||||
  Rat   656 SQGGA--TSTEGTRDVERKMEEEKKGAKKKDK 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARTNP_001135766.1 MIT_spastin 16..95 CDD:239142 67/78 (86%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..156 16/31 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..398 37/60 (62%)
Senescence 427..611 CDD:311082 175/183 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..666 14/32 (44%)
SpartXP_006232427.2 MIT_spastin 27..106 CDD:239142 67/78 (86%)
Senescence 445..629 CDD:399715 175/183 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83688256
Domainoid 1 1.000 710 1.000 Domainoid score I3479
eggNOG 1 0.900 - - E1_KOG2709
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32243
Inparanoid 1 1.050 1120 1.000 Inparanoid score I4585
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50452
OrthoDB 1 1.010 - - D145562at32523
OrthoFinder 1 1.000 - - FOG0006009
OrthoInspector 1 1.000 - - oto137173
orthoMCL 1 0.900 - - OOG6_107088
Panther 1 1.100 - - LDO PTHR21068
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X7703
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.310

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