DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPART and sparta

DIOPT Version :10

Sequence 1:NP_055902.1 Gene:SPART / 23111 HGNCID:18514 Length:666 Species:Homo sapiens
Sequence 2:NP_001107130.1 Gene:sparta / 100005765 ZFINID:ZDB-GENE-080204-37 Length:567 Species:Danio rerio


Alignment Length:663 Identity:282/663 - (42%)
Similarity:376/663 - (56%) Gaps:101/663 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     6 QNGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPG 70
            |..|||||::|||.|.||...:|.||..||.|.|::|...|:.|..|||.|:.:.::....||..
Zfish     2 QTPEPAEIRVIRENYDKALQCLNTGLQLDEAGNKDQALVLYRLGRRHLLSGLQVDTRGGRCTGRC 66

Human    71 WESARQMQQKMKETLQNVRTRLEILEKGLATSLQNDLQEVPKLYPEFPPKDMCEKLPEPQSFSSA 135
            |:||||.|.||.|||:.:..||..||....|.        .:|||..|   :.:.....::|:| 
Zfish    67 WDSARQTQLKMGETLRTITARLGALESASNTG--------QRLYPTLP---VFQDKNSQRAFNS- 119

Human   136 PQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPPAYTPQAAEGHYTVSYGTDSGEFSSVGEE 200
                  .|.:....:..|:.|...::|:     |.|||||||..:||.::|:|.:.....:..:.
Zfish   120 ------RGASGRAPSRPVSPPVGFAVPN-----ELPPAYTPQPTDGHLSLSHGANRAFPDAPHQG 173

Human   201 FYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRF---LDNSLDTVL 262
            ..|....|..|...|:   |::.:|:|||:|||:..|.|:||||||||||:.:   .|.|.:|  
Zfish   174 SRRQAVAPVNLREAGM---EIMFLPSGVQMFFVSAEGRVTAPSYPGYLRIIIYSQDSDGSANT-- 233

Human   263 NRPPGFLQVCDWLYPLVPDRSPVLKCTAGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFEDLL 327
            ...|.:||||||:|||.|| .|||....|.:.||||.....|.:|||||||:||..:|:||::.|
Zfish   234 GYAPAYLQVCDWIYPLYPD-FPVLLSNNGVFTFPDTTAAVPGSYVGVVLSSDLPAGERDLFQEQL 297

Human   328 RQMSDLRLQANWNRAEEENEFQIPGRTRPSSDQLKEASGTDVKQLDQGNKDVRHKGKRGKRAKDT 392
            ..::.||:|.:                                  ::|.         |....||
Zfish   298 SVLAQLRVQVD----------------------------------EEGG---------GATGADT 319

Human   393 S-SEEVNLSHIVPCEPVPEEKPKELPEWSEKVAHNILSGASWVSWGLVKGAEITGKAIQKGASKL 456
            : ||::.||.   ....|||  |..|.||||::.:||:|:||:..|||:|||.||||||:|.:||
Zfish   320 NLSEKIPLSE---ASQTPEE--KTAPVWSEKMSQSILAGSSWLGRGLVRGAEATGKAIQRGGTKL 379

Human   457 RERIQPEEKPVEVSPAVTKGLYIAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHGSKLV 521
            |:.|.|||.|.||||.|||||..||||||||.||||||||||..||..|||||||||||||.||:
Zfish   380 RDNITPEETPAEVSPKVTKGLNAAKQATGGAVKVSQFLVDGVAAVAGKVGKELAPHVKKHGCKLI 444

Human   522 PESLKKDKDGKSPLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGYNAGEA 586
            ||||||.|||.|.:|||.:||.||:||.||:|..||.|.|.|..::|:|||.|||:|||..||:|
Zfish   445 PESLKKGKDGSSKMDGAKLVAGSSIQGLSTLWSSLETAGKTIGKSLSSETVTTVRHKYGDEAGQA 509

Human   587 THHAVDSAVNVGVTAYNINNIGIKAMVKKTATQTGHTLLEDYQIVDNSQRENQEGAANVNVRGEK 651
            ...||.|.|||||||:|::|:.:|.::|.|..||...:::|                  ..:|||
Zfish   510 ADTAVQSTVNVGVTAFNMDNVCLKGVLKATGKQTTKEIVKD------------------TPKGEK 556

Human   652 DEQTKEVKEAKKK 664
            .|.  :.|..||:
Zfish   557 TED--KDKSPKKR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARTNP_055902.1 MIT_spastin 16..95 CDD:239142 35/78 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..156 4/31 (13%)
Ubiquitin-binding region (UBR) domain. /evidence=ECO:0000269|PubMed:37443287 190..380 65/192 (34%)
LC3-interacting region (LIR), mediates interaction with MAP1LC3A AND MAP1LC3C. /evidence=ECO:0000269|PubMed:37443287 193..200 0/6 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..398 6/54 (11%)
Senescence 427..617 CDD:462037 124/189 (66%)
Required for localization to lipid droplets. /evidence=ECO:0000269|PubMed:37443287 431..503 51/71 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..666 7/29 (24%)
spartaNP_001107130.1 MIT 12..91 CDD:469712 35/78 (45%)
Senescence 348..541 CDD:462037 125/192 (65%)

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