DRSC/TRiP Functional Genomics Resources

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Protein Alignment IQSEC2 and SYT1

DIOPT Version :10

Sequence 1:XP_006724642.1 Gene:IQSEC2 / 23096 HGNCID:29059 Length:1520 Species:Homo sapiens
Sequence 2:NP_015420.1 Gene:SYT1 / 856210 SGDID:S000006299 Length:1226 Species:Saccharomyces cerevisiae


Alignment Length:787 Identity:139/787 - (17%)
Similarity:252/787 - (32%) Gaps:292/787 - (37%)


- Green bases have known domain annotations that are detailed below.


Human   285 GSDLSTAVDSPGSQPPYRLSQLPPSSSHMGGPPAGVGLPWAQRARLQPASVALRKQEEEEIKRSK 349
            ||::||.:|.......||                   .|:.|.|.:|..:    ..:::::    
Yeast    28 GSNVSTGIDKLRESESYR-------------------SPFLQLAEIQEHT----NNDDDKL---- 65

Human   350 ALSDSYELSTDLQDKKVEMLERKYGGSFLSRRAA------------------------------- 383
               |..|.....:..|:..:.||.|...|:.|:|                               
Yeast    66 ---DVKECEPTKKHSKLSRIRRKMGRLDLNFRSANEKGSEDDEILVAQHLRNGQDPEEMPFKSEN 127

Human   384 --------------RTIQTAFRQYRMNKNFER---------LRSSASESRMSRRIILSNMRMQFS 425
                          |...|:.....:.:|.:.         |....|.:|:||            
Yeast   128 NIDSIEKVPKPDGERVTLTSSGSDNVKRNSKHAPFIPVKPALEKFPSSNRLSR------------ 180

Human   426 FEEYEKAQNPAYFEGKPASLDEGAMAGARSHRLERGLPYGG--SCGGGIDGGGSSVTTSGEFSND 488
              :|.|:|.|..|.|               .||...||...  |....:   |||...|..|:..
Yeast   181 --DYRKSQEPTLFNG---------------DRLVPTLPTVSRISTSSSV---GSSTAASRYFNPS 225

Human   489 ITELEDSFSKQVKSLAESIDEALNCHPSGPMSEEPGSAQLEKRESKEQQEDSSATSFSDLPLYLD 553
            ...:..|.|....|:..:...|:      |:...|      :.|..:||::.|...|........
Yeast   226 KRAVVASSSSSSSSIKFNSLHAI------PLDATP------QIELAKQQDEISKRRFGRRRSRTV 278

Human   554 DTVPQQSPERLPSTEPPPQGRPEFWAPAP-LPPVPPPVPSGTRED--GSREEGTRRGPGCLECRD 615
            |.....:.......:||       .:|:. :..:.....:...:|  |||.              
Yeast   279 DVFDYINKNNTAKNKPP-------LSPSSFIRTIDEKNTNSLMQDPMGSRG-------------- 322

Human   616 FRLRAAHLPLLTIEPPSDSSVDLSDRSDRGSVH--RQLVYEADGCS---------PHGTLKHKGP 669
                    |||    |.|:::..:|.....:.|  .|::..:...|         ...:::.:|.
Yeast   323 --------PLL----PDDANIISNDTDGAEASHPDHQVLSRSRSQSTSFVQGKGGKRKSIEDEGY 375

Human   670 PGRAPIPHRHYPAPEGPAPAPPGPLPPAPNSGTGPSGVAGGRRLGKCEAAGENSDGGDNESLESS 734
            ..:..:||                       |:||:.|                       ..:.
Yeast   376 HNKLGLPH-----------------------GSGPTSV-----------------------YNNK 394

Human   735 SNSNETINCSSGSSSRDS-----------LREPPATGLCKQTYQRETRHSWDSPAFNNDVVQRRH 788
            ||:|.||   :|.|.|.|           ||....:...:|..|::               |:..
Yeast   395 SNANSTI---TGMSRRSSSIVNALSSFVNLRSSSLSSSRQQHLQQQ---------------QQLQ 441

Human   789 YRIGLNLFNKKPEKGIQYLIERGFLSDT---------PVGVAHFILERKGLSRQMIGEFLGNRQK 844
            .::.::|.:..|....::       ||:         |.|             :.||..|..:..
Yeast   442 QKLDVSLEDLPPVPAPEF-------SDSCKDFLIKLAPYG-------------KFIGIILTEKDD 486

Human   845 QFNRDVLDCVVDE-MDFSSMDLDDALRKFQSHIRVQGEAQKVERLIEAFSQRYCVCNPALVRQ-- 906
            :|.::.|:.::.. .:|.:..||.||||....:.:..|.|:::|||.|||..|.....:..::  
Yeast   487 EFKKNCLNYLLTNCFEFKNDPLDIALRKLLMFLELPKETQQIDRLIMAFSFAYYKAQKSYSKKKG 551

Human   907 ----FRNPDTIFILAFAIILLNTDMYSPSVKAERKMKLDDFIKNLRG--VDNGEDIPRDLLVGIY 965
                :.|.|.::.:||::::|:||.::|:.|:  ||...||:..:..  ...|.:||..:|...|
Yeast   552 IECPWSNADQVYFIAFSLLMLHTDYFNPNNKS--KMTKHDFVDLVHNDKYSGGNEIPMAVLTYFY 614

Human   966 QRIQGRE 972
            :.:..:|
Yeast   615 ENVTAKE 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IQSEC2XP_006724642.1 ATG16 <23..>64 CDD:462536
Sec7 785..973 CDD:460178 47/206 (23%)
IQ_SEC7_PH 995..1124 CDD:465120
KLF1_2_4_N <1350..1457 CDD:425360
SYT1NP_015420.1 Sec7 443..622 CDD:214569 46/201 (23%)
Blue background indicates that the domain is not in the aligned region.

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