DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ARHGAP26 and arhgap42b

DIOPT Version :10

Sequence 1:XP_047272926.1 Gene:ARHGAP26 / 23092 HGNCID:17073 Length:816 Species:Homo sapiens
Sequence 2:XP_021323547.2 Gene:arhgap42b / 569534 ZFINID:ZDB-GENE-120217-5 Length:883 Species:Danio rerio


Alignment Length:895 Identity:424/895 - (47%)
Similarity:535/895 - (59%) Gaps:124/895 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGLPALEFSDCCLDSPHFRETLKSHEAELDKTNKFIKELIKDGKSLISALKNLSSAKRKFADSLN 65
            ||||.|||||..:|||.|||.||.||.|||:||||||||||||..||.||||||:|.:||:.||.
Zfish     1 MGLPTLEFSDSFVDSPDFRERLKCHEIELDRTNKFIKELIKDGHQLICALKNLSAAVQKFSQSLQ 65

Human    66 EFKFQCIGDAETDDEMCIARSLQEFATVLRNLEDERIRMIENASEVLITPLEKFRKEQIGAAKEA 130
            ||:|:||||||||||:.||:|.:||:.:|..:|:||.|:|:||.:|||||||:|||||||||||.
Zfish    66 EFQFECIGDAETDDEVNIAQSFKEFSKLLHTMEEERRRLIQNADDVLITPLERFRKEQIGAAKEG 130

Human   131 KKKYDKETEKYCGILEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFE 195
            |||:|||.|||...|:|||||||:||||.|||||:|:|..||.||:.|||||||:|:|||:|.||
Zfish   131 KKKFDKEAEKYYSTLDKHLNLSSRKKESALQEADAQIDRERQLFYDASLEYVFKIQDVQEKKKFE 195

Human   196 FVEPLLAFLQGLFTFYHHGYELAKDFGDFKTQLTISIQNTRNRFEGTRSEVESLMKKMKENPLEH 260
            |||||||||||||||||.|||||.||..:|.||..::|||||.|..|:.|||:||.:::....:.
Zfish   196 FVEPLLAFLQGLFTFYHEGYELAHDFEPYKQQLQFNLQNTRNNFLSTKQEVENLMNRVRSADQDQ 260

Human   261 KTISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRDSKQITMV-----PFDQKSGGKGGEDESVILK 320
            |....:||||||||||||..|.:|.:|||||.:|::..:|.     |..:::|......|...||
Zfish   261 KPPGQWTMEGYLYVQEKRPLGCTWTRHYCTYDKDNQTFSMCNTEAKPAAKQNGVTSNPPEKFRLK 325

Human   321 SCTRRKTDSIEKRFCFDVEAVD-------------------RPGVITMQALSEEDRRLWMEAMDG 366
            ||.|||||||:||||||:|.|:                   |.|:||:|||||.:||||:|||||
Zfish   326 SCIRRKTDSIDKRFCFDIEVVERNTVYRGSLFRPLQFFFKSRHGIITLQALSESNRRLWLEAMDG 390

Human   367 REPVYNSNKDSQSEGTAQLDSIGFSIIRKCIHAVETR-GINEQGLYRIVGVNSRVQKLLSVLMDP 430
            :||:||.......:....|:..||:.:||||..||.| |:|..||||:.|:||:||||::.:..|
Zfish   391 KEPIYNLPAILSKKEETYLNETGFNFVRKCIQLVEVRAGLNTMGLYRVGGINSKVQKLMTTVFSP 455

Human   431 KTASETETDICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHR 495
            |.||:.:.| ...|:.|||||.||.|||.|..|||.|:....|:.|.|.::|..||..:|:|||:
Zfish   456 KAASDLDLD-PDTWDNKTITSGLKNYLRCLSEPLMTYKLHSDFLMAVKSDDQNYRVCAVHALVHK 519

Human   496 LPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEIL 560
            ||:|||:||::|:.||.||:::.:.|:|||:||||:|||||:|.|||||||:|:|||||||:|||
Zfish   520 LPDKNREMLEILIKHLLNVSSHSESNMMTVSNLGVIFGPTLMRSQEETVAAMMNIKFQNIVVEIL 584

Human   561 IENHEKIFNTVPD------MPLTNAQLHLSRK---KSSDSKPPSCSERPLTLFHTVQSTEKQEQR 616
            |||.||||:..||      .||:..:...||.   .|...||.|.....|.|......|......
Zfish   585 IENLEKIFHQAPDPNVPLLQPLSRPESRRSRAIGLTSGPRKPRSLYTPSLCLADADSDTFSSSSG 649

Human   617 NSIINS--SLESVSSNPNSILNSSSSLQPNMNSSDPDLAVVKPTRPNSLPPNPSPTSPLSPSWPM 679
            ::.|.|  ||.|.||..||...:.||.|                 ....||.|.|.||.|.|   
Zfish   650 STPIGSMDSLSSHSSEQNSSSKTCSSPQ-----------------HKDKPPFPGPRSPFSRS--- 694

Human   680 FSAPSSPMPTSSTSSDS------------SPVRSVAGFVWFSVAAVVLSLARS--SLHAVFSLLV 730
            .|.|..|..|||..|.|            ..:||.........|.:..|:|:|  |||....:..
Zfish   695 SSEPQGPAGTSSPDSSSREQDCPADESFRGNLRSTTAPTKAPHAQLNRSIAQSLRSLHLTEGVCK 759

Human   731 NFVPCHPNLH----------------------------------------------LLFDRPEEA 749
            :|.   .::|                                              |||:.|...
Zfish   760 SFA---GSVHSLACVDGSKSTTCLDLPPKALLRRKLDNNSSTNGYQRPGSVVAARALLFENPSAV 821

Human   750 VHEDSSTPFRKAKALYACKAEHDSELSFTAGTVFDNAECPSASTAIFTAT 799
            .|....   |.|||:|:|:|||.:||||..|..|.|. .||.......||
Zfish   822 KHPPVG---RDAKAIYSCEAEHSNELSFPQGAHFSNV-YPSVEPGWLQAT 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARHGAP26XP_047272926.1 BAR_GRAF 19..225 CDD:153320 148/205 (72%)
BAR-PH_GRAF_family 267..371 CDD:269953 63/127 (50%)
RhoGAP_Graf 364..563 CDD:239839 106/199 (53%)
SH3 759..>790 CDD:473055 16/30 (53%)
arhgap42bXP_021323547.2 None

Return to query results.
Submit another query.