Sequence 1: | NP_001338457.1 | Gene: | SETX / 23064 | HGNCID: | 445 | Length: | 2706 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936221.1 | Gene: | setx / 100145435 | XenbaseID: | XB-GENE-966858 | Length: | 2535 | Species: | Xenopus tropicalis |
Alignment Length: | 2873 | Identity: | 1217/2873 - (42%) |
---|---|---|---|
Similarity: | 1619/2873 - (56%) | Gaps: | 508/2873 - (17%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MSTCCWCTPGGASTIDFLKRYASNTPSGE-FQTADEDLCYCLECVAEYHKARDELPFLHEVLWEL 64
Human 65 ETLRLINHFEKSMKAEIGDDDELYIVDNNGEMPLFDITGQDFENKLRVPLLEILKYPYLLLHERV 129
Human 130 NELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGKVDRDDYYDLQEVLL 194
Human 195 CLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLGICMLLTILEEQAMDSLLLG 259
Human 260 SDKQNDFMQSILHTMEREADDDSVDPFWPALHCFMVILDRLGSKVWGQLMDPIVAFQTIINNASY 324
Human 325 NREIRHIRNSSVR-TKLEPESYLDDM-VTCSQIVYNYNPEKTKKDSGWRTAICPDYCPNMYEEME 387
Human 388 TLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMDLKDLGVAYIAQVVNHLYSEVKEVLNQTDAVCD 452
Human 453 KVTEFFLLILVSVIELHRNKKCLHLLWVSSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAM 517
Human 518 IS-SLSLHSMPSN-SVQLAYVQLIRSLLKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQE 580
Human 581 THELQSCLKQIIRNIKFKA--PPCNTFVDLTSACK----ISPASYNKEESEQMGKTSRKDMHCLE 639
Human 640 ASSPTFSKEPMKVQDSVLIKADNTIEGDNNEQNYIKDVKLEDHLLAGSCLKQSSKNIFTERAEDQ 704
Human 705 IKISTRKQKSVKEISSYTPKDCTSRNGPERGCDRGIIVSTRLLTDSSTDALEKVSTSNEDFSLKD 769
Human 770 DALAKTSKRKTKVQKDEICAKLSHVIKKQ--HRKSTLVDNTINLDENLTVSNIESFYSRKDTGVQ 832
Human 833 KGDGFIHNLSLDPSGVLDDKNGEQKSQNNVLPKEKQLKNEELVIFSFHE-----------NNC-- 884
Human 885 -------KIQEFHVDGKELIPFTEMTNASEKKSSPFKDLMTVPESRDEEMSN---STSVIYSNLT 939
Human 940 REQAPD--------------ISPKSDTLTDSQIDRDLHKLSLLAQASVITFPSDS---PQNSSQL 987
Human 988 QRKVKEDKRCFTANQNNVG------DTSRGQVIIISDSDDDDDERILSLEKLTK-QDKICLEREH 1045
Human 1046 PEQHVSTVNSKEEKNPVKEEKTETLFQFEESDSQCFEFESSSEVFSVWQDHPDDNNSVQDGEKKC 1110
Human 1111 LAPI-------------ANTTN------GQGCTDYVSEVVKKGAEGIEEHTRPRSISVEEFCEIE 1156
Human 1157 VKKPKRKRSEKPMAEDPVRPSSSVRNEGQSDTNKRDLVGNDFKSIDRRTSTPNSRIQRA----TT 1217
Human 1218 VSQKKSSKLCTCTEPIRKVPVSKTPKKTHSDAKKGQN-RSSNYLSCRTTPAIVPPKKFRQCPEPT 1281
Human 1282 STAEKLGLKKGPRKAYELSQRSLDYVAQLRDHGKTVGVVDTRK-KTKLISPQNLSVRNNKKLLTS 1345
Human 1346 QELQMQRQIRPKSQKNRRRLSDCESTDVKRAGSHTAQNSDIFVPESDRSDYNCTGGTEVLANSNR 1410
Human 1411 KQLIKCMPSEPETIKAKHGSPATDDACPLNQCDSVVLNGTVPTN-----------EVIVSTSEDP 1464
Human 1465 LGGGDPTARHIEMAALKEGEPDSSSDAEEDNLFLTQNDPEDMDLCSQMENDNYKLIELIHGKDTV 1529
Human 1530 EVEEDSVSR-----------PQLESLSGT------------KCKYKDCLETTKNQGEYCPKHSEV 1571
Human 1572 KAADEDVFRKPGLPPPASKPLRPTTKIFSSKSTSRIAGLSKSLETSSALSPSLKNKSKGIQSILK 1636
Human 1637 VPQ-PVPLIAQKPVGE-------MKNSCNVLHPQSPNNS--NRQGCKVPFGESKYFPSSSPVNIL 1691
Human 1692 LSSQSVSDTFVKEVLKWKYEMFLNFGQCGPPASLCQSISRPVPVRFHNYGDYFNVFFPLMVLNTF 1756
Human 1757 ETVAQEWLNSPNRENFY----QLQVRKF-PADYIKYWEFAVYLEECELAKQLYPKENDLVFL--- 1813
Human 1814 --APERINEEKKDTERNDIQDLHEYHSGYVHKFRRT----SVMRNGKTECYLSIQTQENFPANLN 1872
Human 1873 ELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTKDLLTTTSERIIAYLRDFNED 1937
Human 1938 QKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNR 2002
Human 2003 VLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNH 2067
Human 2068 RMKKELPSHVQAMHKRKEFLDYQLDELSRQRALCRGGREIQRQELDENISKVSKERQELASKIKE 2132
Human 2133 VQGRPQKTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIH 2197
Human 2198 RCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRMHP 2262
Human 2263 DICLFPSNYVYNRNLKTNRQTEAIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII 2327
Human 2328 KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRK-GPAEVDTVDAFQGRQKDCVIVTCVR 2391
Human 2392 ANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWA 2456
Human 2457 LKENQHWNQLIQDAQKRGAIIKTCDKNYRHDAVKILKLKPVLQRSLTHPPTIAPEGSRPQGGLPS 2521
Human 2522 SKLDS------------------------GFAKTSVAASLYHTPSDSKEITLTVTSKDPERPPVH 2562
Human 2563 DQLQDPRLLKRMGIEVKGGIFLWDPQPSSPQHPGATPPTGEPGFPVVHQDLSHIQQPAAVVAALS 2627
Human 2628 SHKPPVRGEPPAASPEASTCQSKCDDPEEELCHRREARAFSEGEQEKCGSETHHTRRNSRWDKRT 2692
Human 2693 LEQEDSSSKKRKL 2705 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SETX | NP_001338457.1 | SEN1_N | 37..>351 | CDD:315409 | 219/315 (70%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1158..1219 | 16/64 (25%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1237..1258 | 5/21 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1351..1385 | 9/33 (27%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1579..1604 | 15/24 (63%) | |||
AAA_11 | 1933..2218 | CDD:315699 | 191/284 (67%) | ||
Bipartite nuclear localization signal. /evidence=ECO:0000255 | 2070..2087 | 6/16 (38%) | |||
AAA_12 | 2225..2424 | CDD:315700 | 126/199 (63%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2503..2525 | 5/21 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2585..2606 | 4/20 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2626..2706 | 22/80 (28%) | |||
Necessary for nuclear localization | 2690..2706 | 10/16 (63%) | |||
setx | XP_002936221.1 | DEXXQc_SETX | 1840..2157 | CDD:350800 | 210/324 (65%) |
AAA_12 | 2128..2323 | CDD:404073 | 126/199 (63%) | ||
PHA03247 | <2365..2534 | CDD:223021 | 54/235 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 740 | 1.000 | Domainoid score | I1467 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H41003 | |
Inparanoid | 1 | 1.050 | 1940 | 1.000 | Inparanoid score | I736 |
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG39395 | |
OrthoDB | 1 | 1.010 | - | - | D148890at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000219 | |
OrthoInspector | 1 | 1.000 | - | - | oto159687 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10887 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4532 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.080 |