Sequence 1: | XP_005255239.1 | Gene: | SMG1 / 23049 | HGNCID: | 30045 | Length: | 3689 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001284967.1 | Gene: | nonC / 31625 | FlyBaseID: | FBgn0263968 | Length: | 3218 | Species: | Drosophila melanogaster |
Alignment Length: | 3937 | Identity: | 997/3937 - (25%) |
---|---|---|---|
Similarity: | 1569/3937 - (39%) | Gaps: | 1028/3937 - (26%) |
- Green bases have known domain annotations that are detailed below.
Human 58 LQPSNSAVVSRQRHDDTRVHADI-----QNDEKGGYSVNGGSGENTYGR---------KSLGQEL 108
Human 109 RVNNVTSP----EFTSVQHGSRALATKDM--------------RKSQE------RSMSYSDESRL 149
Human 150 SNLLRRITREDDRDRRLATVKQLKEFIQQPEN----KLVLVKQLDNILAAVHD----VLNESSKL 206
Human 207 LQELRQEGACCLGLLCASLSYEAEKIFKWIFSKFSSSAKDEVKLLYLCATYKALETVGEKKAFSS 271
Human 272 VMQLVMTSLQSILENVDTPELLCKCVKCILLVARCYPHIFSTNFRDTVDILVGWHIDHTQKPSLT 336
Human 337 QQVSGWLQSLEPFWVADLAFSTTLLGQFLEDMEAYAEDLSHVASGESVDEDVPPPSVSLPKLAAL 401
Human 402 LRVFSTVVRSIGERFSPIRGPPITEAYV---TDVLYRVMRCVTAANQVFFSEAVLTAANECVGVL 463
Human 464 L----GSLDPSMTIHCDMVITYGLDQLENCQTCGTDYIISVLNLLTLIVEQINTKLPSSFVEKLF 524
Human 525 IPSSKLLFLRYHKEKEV-VAVAHAVYQAVLSLKNIPVLETAYKLILGEMTCALNNLLHSLQLPEA 588
Human 589 CSEIKHEAFKNHVFNVDNAKFVVIFDLSALTTIGNAKNSLIGMWALSPTVFALLSKNLMIVHSDL 653
Human 654 AVHFPAIQYAVLYTLYSHCTRHDHFISSSLSSSSPSLFDGAVISTVTTATKKHFSIILNLL-GIL 717
Human 718 LKKDNLNQDTRKLLMTWALEAAVLMKKSETYAPLFSLPSFHKFCKGL--LANTLVE-DVNICLQA 779
Human 780 CSSLHALSSSLPDDLLQRCVDVCRVQLVHSGTRIRQ----------AFGKLLKSIPLDVVLSNNN 834
Human 835 HTEIQEISLALR---------SHMSKAPSNTFHPQDFSDVISFILYGNSHRTGKDNWLERLFY-S 889
Human 890 CQ--RLDKRDQSTIPRNLLKTDAVLWQWAIWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAA 952
Human 953 HTLNPDQDVSQWTTAD-NDEGHGNNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRTFF 1016
Human 1017 YTNRQTCQDWLTRIRLSIMRVGLLAGQPAVTVRHGFDLLTEMKT--TSLSQGNELEVTIMMVVEA 1079
Human 1080 LCELHCPEA--IQGIAVWSSSIVGKNLLWINSVAQQAEGRFEKASVEYQEHLCAMTGVDCCISSF 1142
Human 1143 DKSVLTLANAGRNSASPKHSLNGESRKTVLSK---PTDSSPEVINYLGNKACECYISIADWAAV- 1203
Human 1204 ---QEWQNAIHD------LKKSTSSTS----LNLKADFNYIKSLSSFES--GKFVECTEQLELLP 1253
Human 1254 G---ENINLLAGGSKEK--------------IDMKKLLPNMLSPDPRELQKSIEVQLLRSSVCLA 1301
Human 1302 TALNPIEQDQKWQSITENVVKYLKQTSRIAIGPLRLSTLTVSQSLPVLSTLQLYCSSALENTVSN 1366
Human 1367 RLSTEDCLIPLFSEALRSCKQHDVRPWMQALRYTMYQNQLLEKIKEQTVPIRSHLMELGLTAAKF 1431
Human 1432 ARKRGNVSLATRLLAQCSEVQLGKTTTAQDLVQHFKKLSTQGQVDEKWGPEL-----DIEKTKLL 1491
Human 1492 YTAGQSTHAMEMLSS---CA---ISFCKSVKAEYAVAKSILTLAKWIQAEWKEISGQLKQVYRAQ 1550
Human 1551 HQQNFTGLSTLSKNIL--TLIELPSVNTMEEEYPRIESESTVHIGVGEPDFILGQLYHLSSVQAP 1613
Human 1614 EVAKSWAALASWAYRWGRKVVDNA---SQGEGVRL-------LPREKSEVQNLLPDTITEEEKER 1668
Human 1669 IYGILGQAVCRPAGIQDEDITLQITESEDNEEDDMVDVIWRQLISSCPWLSELDESATEGVIKVW 1733
Human 1734 RKVVDRIFSLYKLSCSAYFTFLKLNAGQIPLDEDDP----------RLHLSHRVEQSTDDMIVMA 1788
Human 1789 TLRLLRLLVKHAGELRQYLEHGLETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSP 1853
Human 1854 HLILYPAIVGTISLSSESQASGNKFSTAIPTLLGNIQGEELLVSECEGGSPPASQDSNKDEPKSG 1918
Human 1919 LNEDQAMMQDCYSKIVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQ 1983
Human 1984 LEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAI 2048
Human 2049 ENALEKLKTPLNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPGEV 2113
Human 2114 SAR----DTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVN 2174
Human 2175 TMFATINRQETPR---FHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQKAQDS 2236
Human 2237 YQTPQNPGI-----VPRP-SELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEATPPNL 2295
Human 2296 LAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFE 2360
Human 2361 KGNIKVDFTFMRAKCFLVKGQKYNDLSFQGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCE 2425
Human 2426 QVLHIMRRGRETLLTLLEAFVYDPLVDWTAGGEA-----------------GFAGAVYGGGGQQA 2473
Human 2474 ESKQSK---REMEREITRSLFSSRVAEIKVNWFKNRDEMLVVLPKLDGSLDEYLSLQ----EQLT 2531
Human 2532 DVEKL-----QGKLLEEIEFLEGAEGVDHPSHTLQHR------YSEHTQLQTQQRAVQ-EAIQVK 2584
Human 2585 LNEFEQWITHYQAAFNNLEATQLASLLQEISTQMDLGPPSYVPATAFLQNAGQAHLISQCEQLEG 2649
Human 2650 EVGALLQQRRSVLRGCLEQLHHYATVALQYPKAIFQKHRIEQWKTWMEELICNTTVERCQELYRK 2714
Human 2715 YEMQYAPQPPPTVCQFITATEMTLQRYAADINSRLIRQVERLKQEAVTVPVCEDQLKEIERCIKV 2779
Human 2780 FLHENGEEGSLSLASVIISALCTLTRRNLMMEGAASSAGEQLVDLTSRDGAWFLEELCSMSGNVT 2844
Human 2845 CLVQLLKQCHLVPQDLDIPNPMEASETVHLANGVYTSLQE--LNSN-----FRQIIFPEALRCLM 2902
Human 2903 KGEYTLESMLHELDGLIEQTTDGVPLQTLVESLQAYLRNAAMGLEEETHAHYIDVARLLHAQYGE 2967
Human 2968 LIQPRNGSVDETPKMSAGQMLLVAFDGMFAQVETAFSLLVEKLNKMEIPIAWRKIDIIREARSTQ 3032
Human 3033 VNFFDDDNHR---QVLEEIFFLKRLQTIKEFFRLCGTFSKTLSGS--SSLEDQNTVNGPVQIVNV 3092
Human 3093 ------KTLFRNSCF----SE----------DQMAKPIKAFTADFVRQLLIGLPNQALGLTLCSF 3137
Human 3138 ISALGVDIIAQVEAKDFGAESKVSVDDLCKK----------AVEHNIQIGKFSQLVMNRATVLAS 3192
Human 3193 SYDTAWKK----------HDLVR-RLETSISSC-------KTSLQRV---------QLHIAMFQW 3230
Human 3231 --QHEDLLINRPQAMSVTPPPRSAILTSMKKKLHTLSQIETSIATVQEKLAALESSIEQRL---- 3289
Human 3290 KWAGGANPALAPVLQDF-----------------------EATIAERRNLVLKESQRASQVTFLC 3331
Human 3332 SNIIHFESLRTRTAEALNLDAALFELIKR--CQQMCSFASQFNSSVSELELRLLQRVDTGLEHPI 3394
Human 3395 GSSEWLLSAHKQLTQDM-STQRAIQTEKEQQIETVCETIQNLVDNIKTVLTGHNRQLGDVKHLLK 3458
Human 3459 AMAKDEEAALADG-EDVPYENSVRQFLGEYKSWQDNIQTVLFTLVQAMGQVRSQEHVEMLQEITP 3522
Human 3523 TLKELKTQSQSIYNNLVSFASPLVTDATNECSSPTSSATYQPSFAAAVRSNTGQKTQPDVMSQNA 3587
Human 3588 RKLIQKNLATSADTPPSTVPGTGKSVACSPKKAVRDPKTGKAVQERNSYAVSVWKRVKAKLEGRD 3652
Human 3653 VDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGWTAWV 3689 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMG1 | XP_005255239.1 | SMG1 | 631..1242 | CDD:292413 | 151/660 (23%) |
PIKKc_SMG1 | 2121..2454 | CDD:270714 | 174/341 (51%) | ||
FATC | 3659..3688 | CDD:280430 | 21/28 (75%) | ||
nonC | NP_001284967.1 | SMG1 | 571..1140 | CDD:292413 | 148/651 (23%) |
Rapamycin_bind | 1738..1845 | CDD:285924 | 28/120 (23%) | ||
PIKKc_SMG1 | 1894..2196 | CDD:270714 | 175/342 (51%) | ||
FATC | 3189..3217 | CDD:280430 | 21/27 (78%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165159038 | |
Domainoid | 1 | 1.000 | 321 | 1.000 | Domainoid score | I1235 |
eggNOG | 1 | 0.900 | - | - | E1_COG5032 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 899 | 1.000 | Inparanoid score | I384 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45627 | |
OrthoDB | 1 | 1.010 | - | - | D12810at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007362 | |
OrthoInspector | 1 | 1.000 | - | - | oto89107 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104562 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2799 |
SonicParanoid | 1 | 1.000 | - | - | X6240 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.700 |