DRSC/TRiP Functional Genomics Resources

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Protein Alignment WDTC1 and Wdtc1

DIOPT Version :10

Sequence 1:NP_001263181.1 Gene:WDTC1 / 23038 HGNCID:29175 Length:677 Species:Homo sapiens
Sequence 2:NP_001101378.1 Gene:Wdtc1 / 313020 RGDID:1310362 Length:676 Species:Rattus norvegicus


Alignment Length:677 Identity:660/677 - (97%)
Similarity:669/677 - (98%) Gaps:1/677 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASG 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASG 65

Human    66 SDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHDLTVKETIHMF 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 SDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHDLTVKETIHMF 130

Human   131 GDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEYCGQLVEAKCLTVNPQ 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.:|||||||||||
  Rat   131 GDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEYCGPMVEAKCLTVNPQ 195

Human   196 DNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLP 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 DNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLP 260

Human   261 DYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSSGEVQNGKMST 325
            |||:||||||||||||||||||||||||||||||||||||||||||||||||||. |||||||||
  Rat   261 DYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSV-EVQNGKMST 324

Human   326 NGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPYLERVKQQANEAFACQQWTQAIQLYSKAVQ 390
            |||||||||||||||||||||||:|.:||||||||||||||||||||||||||||||||||||||
  Rat   325 NGVSNGVSNGLHLHSNGFRLPESKGCISPQVELPPYLERVKQQANEAFACQQWTQAIQLYSKAVQ 389

Human   391 RAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALEC 455
            :||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   390 KAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALEC 454

Human   456 LDDFKGKFPEQAHSSACDALGRDITAALFSKNDGEEKKGPGGGAPVRLRSTSRKDSISEDEMVLR 520
            |||||||||||||||||||||||||||||||:||||||..|||.|||||||||||||||||||||
  Rat   455 LDDFKGKFPEQAHSSACDALGRDITAALFSKSDGEEKKAAGGGGPVRLRSTSRKDSISEDEMVLR 519

Human   521 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNC 585
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   520 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNC 584

Human   586 LQPHPSYCFLATSGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYR 650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||:|||.|||:||||
  Rat   585 LQPHPSYCFLATSGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNANPLEAMLLDMGYR 649

Human   651 ITGLSSGGAGASDDEDSSEGQVQCRPS 677
            |||||||||||||||||:|||||||||
  Rat   650 ITGLSSGGAGASDDEDSAEGQVQCRPS 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDTC1NP_001263181.1 WD40 <39..215 CDD:441893 173/175 (99%)
WD 1 45..84 38/38 (100%)
WD40 repeat 51..88 CDD:293791 36/36 (100%)
WD 2 88..129 40/40 (100%)
WD40 repeat 93..131 CDD:293791 37/37 (100%)
WD 3 132..172 39/39 (100%)
WD40 repeat 138..178 CDD:293791 39/39 (100%)
WD 4 182..222 37/39 (95%)
WD40 repeat 232..271 CDD:293791 37/38 (97%)
WD 5 265..305 39/39 (100%)
Spy 359..>468 CDD:443119 107/108 (99%)
TPR 1 362..395 31/32 (97%)
TPR repeat 366..390 CDD:276809 23/23 (100%)
TPR repeat 395..428 CDD:276809 32/32 (100%)
TPR 2 397..432 34/34 (100%)
TPR repeat 433..457 CDD:276809 23/23 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 487..509 17/21 (81%)
WD 6 535..575 39/39 (100%)
WD40 repeat 537..577 CDD:293791 39/39 (100%)
WD40 <546..>626 CDD:475233 79/79 (100%)
WD 7 578..617 38/38 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 655..677 20/21 (95%)
Wdtc1NP_001101378.1 WD40 <39..215 CDD:441893 173/175 (99%)
WD40 repeat 51..88 CDD:293791 36/36 (100%)
WD40 repeat 93..131 CDD:293791 37/37 (100%)
WD40 repeat 138..178 CDD:293791 39/39 (100%)
WD40 repeat 232..271 CDD:293791 37/38 (97%)
Spy 358..>467 CDD:443119 107/108 (99%)
TPR repeat 365..389 CDD:276809 23/23 (100%)
TPR repeat 394..427 CDD:276809 32/32 (100%)
TPR repeat 432..456 CDD:276809 23/23 (100%)
WD40 repeat 536..576 CDD:293791 39/39 (100%)
WD40 <545..>625 CDD:475233 79/79 (100%)

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