DRSC/TRiP Functional Genomics Resources

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Protein Alignment KDM1A and CG6034

DIOPT Version :9

Sequence 1:XP_006710537.1 Gene:KDM1A / 23028 HGNCID:29079 Length:878 Species:Homo sapiens
Sequence 2:NP_649005.1 Gene:CG6034 / 39974 FlyBaseID:FBgn0036750 Length:479 Species:Drosophila melanogaster


Alignment Length:610 Identity:157/610 - (25%)
Similarity:239/610 - (39%) Gaps:194/610 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   295 TKKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLG 358
            ||:|.|::|||:|.||:|||.:|...|. :|.|.||.||:|||:.|....|.:.||||....|..
  Fly    13 TKETAKIVIIGAGASGVAAATKLLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEE 77

Human   359 GNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEAT-SYLSHQLDFN--- 419
            ||   ||.::|                      |:.|         :|:.| .|:.|.:..|   
  Fly    78 GN---VVYEKV----------------------KDLD---------VLDRTGDYVVHFIRSNKEI 108

Human   420 ---VLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQ 481
               |.|.....|..|.||..: .|..|.|....:||                       :.:||.
  Fly   109 LTDVHNKALTELTNAFEVPGE-HEGSVGDAFNAYWK-----------------------ENIHQL 149

Human   482 YKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSPLFFCSDV- 545
            .        |.|.|              :.|      |.|..|::.:..::|        |.:: 
  Fly   150 V--------PNDKT--------------IAK------EAQDCLKKVICSMDA--------CDNLS 178

Human   546 YLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVP--VALAEGL 608
            .||.|       :|.|  ||.|.....||   |.|...::|..   .:.|.....|  ..:.:| 
  Fly   179 ELSYR-------NFRN--FAIAGGDQNLS---WRQKGYWKFLS---VLLNSSDNQPGDQGILKG- 227

Human   609 DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWK 673
            .:.||..:.::.:...|    .:..|..:..|: ..|.|:||:.||||:::...: |||.||..|
  Fly   228 HVHLNKRIAKINWEGDG----ELTLRCWNGQFV-SADHVICTVSLGVLREKHHKL-FVPALPASK 286

Human   674 TSAVQRMGFGNLNKVVLCFD--------------------------RVFWDPSVNLFGHVGSTTA 712
            ..:::.:..|.:||..|.|:                          :.||..||..|..|..   
  Fly   287 IRSIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRSGKYFWLESVCYFHRVDC--- 348

Human   713 SRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGI------FGSSAVPQPKE 771
                        :..:|...:.|..:..:|.||::       .:|:||      |...:||.||.
  Fly   349 ------------QPRLLQGWIIGAHSRYVETISEE-------QVLEGIMWMFRKFLKFSVPYPKN 394

Human   772 TVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP----QPIPRLFFAGEHTIRN 832
            .:.|:|:::|..||||||         |...|..:..|.:...:|    ...||:.||||.:.||
  Fly   395 FLRSQWQSNPNFRGSYSY---------YSTYADELRTGRTDLASPLVDVTGRPRIQFAGEASSRN 450

Human   833 YPATVHGALLSGLREAGRIADQFLG 857
            :.:|||||:.||.|||.|:.:.:.|
  Fly   451 HFSTVHGAIESGWREAERLNEFYEG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KDM1AXP_006710537.1 SWIRM 197..284 CDD:282311
NAD_binding_8 303..361 CDD:290186 28/58 (48%)
Amino_oxidase 308..851 CDD:279874 147/589 (25%)
SurA_N_3 <395..491 CDD:304439 19/102 (19%)
NAT_SF <441..>549 CDD:302625 16/108 (15%)
CG6034NP_649005.1 Amino_oxidase 33..470 CDD:279874 143/583 (25%)
NAD_binding_8 <35..88 CDD:290186 24/77 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0685
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2622
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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