DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galnt12 and Pgant9

DIOPT Version :9

Sequence 1:NP_766281.1 Gene:Galnt12 / 230145 MGIID:2444664 Length:576 Species:Mus musculus
Sequence 2:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster


Alignment Length:504 Identity:226/504 - (44%)
Similarity:306/504 - (60%) Gaps:61/504 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse    71 GAHGEAVRL--QLQGEELRLQEESVKQHQINIYLSDRISLHRRLPERWNPLCREVKYDYDNLPKT 133
            |..|:.|||  ::..|..:..::...::..|.|:||.||:||.||:..:..|::......|||||
  Fly   147 GELGKPVRLPKEMSDEMKKAVDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARYLTNLPKT 211

Mouse   134 SVVIAFYNEAWSTLLRTVYSVLETSPDILLEEVILVDDYSDREHLKERLANELSQLPKVRLIRAS 198
            .|:|.|:||||:.|||||:|||:.||:.|:.::||||||||..|||.:|.:..:..|||::||..
  Fly   212 DVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAYPKVQIIRGQ 276

Mouse   199 RREGLVRARLLGASAARGEVLTFLDCHCECHEGWLEPLLQRIHEKESAVVCPVIDVIDWNTFEY- 262
            :||||:|||:|||:.|:..|||:||.||||.||||||||.||....:.|||||||||...|.|| 
  Fly   277 KREGLIRARILGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYH 341

Mouse   263 LGNSGEPQIGGFDWRLVFTWHVVPQRERQSMRSPIDVIRSPTMAGGLFAVSKRYFDYLGSYDTGM 327
            ..:||...:|||||.|.|:||.||:|||:...|..:.:.|||||||||::.:.:||.||:||:|.
  Fly   342 YRDSGGVNVGGFDWNLQFSWHPVPERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGF 406

Mouse   328 EVWGGENLEFSFRIWQCGGTLETHPCSHVGHVFPKQAPYSRSKAL----ANSVRAAEVWMDEFKE 388
            ::|||||||.||:.|.||||||..|||||||:|.|::||.....:    .||||.|||||||:.:
  Fly   407 DIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSPYKWRSGVNVLKKNSVRLAEVWMDEYSQ 471

Mouse   389 LYYHR--NPQARLEPFGDVTERKKLRAKLQCKDFKWFLDTVYPELHVPEDRPGFFGMLQNRGLRG 451
            .||||  |.:.   .:|||::|:|||..|:||.|||:||.:||||.:|.|... .|.::|.|..|
  Fly   472 YYYHRIGNDKG---DWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFIPGDSVA-HGEIRNLGYGG 532

Mouse   452 -YCLDYNPPNENHVE-----------------------------------GHQVLLYLCHGMGQN 480
             .||| .|..:.|.:                                   |..|.|:.|||...|
  Fly   533 RTCLD-APAGKKHQKKAVGTYPCHRQGGNQYWMLSKAGEIRRDDSCLDYAGKDVTLFGCHGGKGN 596

Mouse   481 QFFEYTTRKEIRYNTRQ-----PEACITVEDGKDTLVMDLCRETVPENQ 524
            ||:.|      |.||:|     ...|:.:.:.||.|:|:.|..::...|
  Fly   597 QFWTY------RENTKQLHHGTSGKCLAISESKDKLLMEECSASLSRQQ 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Galnt12NP_766281.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..58
WcaA 129..424 CDD:223539 171/301 (57%)
Catalytic subdomain A 130..239 67/108 (62%)
pp-GalNAc-T 134..428 CDD:133004 168/300 (56%)
Catalytic subdomain B 299..361 39/61 (64%)
Ricin_B_lectin 440..569 CDD:279046 30/126 (24%)
RICIN 442..571 CDD:238092 30/124 (24%)
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 157/270 (58%)
pp-GalNAc-T 213..510 CDD:133004 168/299 (56%)
Ricin_B_lectin 521..640 CDD:279046 30/127 (24%)
RICIN 523..642 CDD:238092 30/124 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842515
Domainoid 1 1.000 220 1.000 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.721928 Normalized mean entropy S3838
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.700

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