Protein Alignment RAB21 and ypt1

DIOPT Version :9

• Sequence 1: NP_055814.1
• Gene: RAB21 / 23011
• HGNCID: 18263
• Length: 225
• Species: Homo sapiens
• Sequence 2: NP_596205.1
• Gene: ypt1 / 2539784
• PomBaseID: SPBC1703.10
• Length: 203
• Species: Schizosaccharomyces pombe
• Alignment Length: 205
• Identity: 72/205 - (35%)
• Similarity: 119/205 - (58%)
• Gaps: 8/205 - (3%)

Human    18 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFH 82
            |.||::|:|:..|||:.|:||:.::.:.:.:|:|:...|..:...:.||.|.|.||||||||||.
pombe     7 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFR 71

Human    83 ALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEA 147
            .:...|||.::|.|:|||:||:|||..||.|::|:.:.....:...:||||.|:..::.|....|
pombe    72 TITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVA 136

Human   148 ESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEP 212
            :.:|:|:......||||.:..:|:.||.:.:      |:.|| .||.:.....|:..|::.....
pombe   137 KEFADSLNIPFLETSAKDSTNVEQAFLTMSR------QIKER-MGNNTFASSNAKSSVKVGQGTN 194

Human   213 QAQTSGGGCC 222
            .:|:| ..||
pombe   195 VSQSS-SNCC 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB21	NP_055814.1	Rab21	20..181	CDD:133323	60/160 (38%)
		Ras	21..182	CDD:278499	59/160 (37%)
ypt1	NP_596205.1	Rab1_Ypt1	7..172	CDD:206661	62/170 (36%)
		RAB	9..172	CDD:197555	61/168 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910