DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB21 and rab-21

DIOPT Version :10

Sequence 1:NP_055814.1 Gene:RAB21 / 23011 HGNCID:18263 Length:225 Species:Homo sapiens
Sequence 2:NP_495854.1 Gene:rab-21 / 187932 WormBaseID:WBGene00004279 Length:207 Species:Caenorhabditis elegans


Alignment Length:207 Identity:110/207 - (53%)
Similarity:152/207 - (73%) Gaps:9/207 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    16 RAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 80
            :::.||:||||||||||:|||||:.||||:.||::|:||||..|.:|:...:.:|.||||||||:
 Worm     9 KSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEK 73

Human    81 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQ 145
            :|||||||||.|||.:||:||||..||:||||||.|::..|||...:.|||||||||:||.|:.|
 Worm    74 YHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQ 138

Human   146 EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDD 210
            :||:||||.||.:..|||:.|.||.:.|..|..:|||.::       ..|::|.:..|.:::||:
 Worm   139 DAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSR-------TRSTEPPSTNRSIRLIDN 196

Human   211 EPQAQTSGGGCC 222
            : :|:.| ..||
 Worm   197 D-EAERS-KKCC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB21NP_055814.1 Rab21 20..181 CDD:133323 98/160 (61%)
rab-21NP_495854.1 Rab21 13..174 CDD:133323 98/160 (61%)

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