DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SNW1 and Bx42

DIOPT Version :9

Sequence 1:NP_001305773.1 Gene:SNW1 / 22938 HGNCID:16696 Length:571 Species:Homo sapiens
Sequence 2:NP_001259370.1 Gene:Bx42 / 31840 FlyBaseID:FBgn0004856 Length:547 Species:Drosophila melanogaster


Alignment Length:482 Identity:304/482 - (63%)
Similarity:364/482 - (75%) Gaps:13/482 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFP 65
            |:|:|.||.||....|:.:..........:..:|||::...||||.||.|:|....|||||||||
  Fly     1 MSLSSLLPTPTNAIWDREDERRLVARGAPKIGALVSAKIAAPPYGQRKDWVPHTDADFGDGGAFP 65

Human    66 EIHVAQYPLDM---GRKKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNA 127
            |||||||||.:   |...|.|:|||:::|.:||:|||||||||..|||::||..:.|:|.||:..
  Fly    66 EIHVAQYPLGLGAPGNVGKKSDALAVRLDDKGKVKYDAIARQGHGKDKIVYSSISQLLPAEVLAE 130

Human   128 DDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGA 192
            |..:|||||||.:.|.||:||:||||..:||:.:|:|||.|.|..|||||||||||||..|||||
  Fly   131 DADELQRPDEETVMETTEETRLALEKLTNQKITSALPVRHAQKAGPAQYIRYTPSQQGDTFNSGA 195

Human   193 KQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNA 257
            |||||||||.|.||||||:|:||||||||||||||||:||||||:|||||:||||||||||||||
  Fly   196 KQRVIRMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVLHSPSRKVTVKEQKEWKIPPCISNWKNA 260

Human   258 KGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEE 322
            |||||||||||||||||||.|||||.|||:||||||||||||||||.|:|:|:|:|||||||.|:
  Fly   261 KGYTIPLDKRLAADGRGLQQVHINEKFAKMAEALYIADRKAREAVEARSQLEKKLAQKEKEKKED 325

Human   323 KLREMAQKARERRAGIKTHVEKE-------DGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKL 380
            .||.|||:|||.|||::.....|       ..|.|||:::|.:|::|||.||||.||||:|||||
  Fly   326 MLRMMAQRAREERAGLRNPEAAEPSGSGATGSEVRERNDLRAERQRERQRDRNLQRAAPEKRSKL 390

Human   381 QRNENRDISEVIALGVPNPRTSN-EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMA 444
            |:...|||||.||||:|.....| |..:||||||.:||||||:  |:||.|||||:.||....:.
  Fly   391 QKERERDISEQIALGLPAKSAGNGETLFDQRLFNTTKGMDSGY--GDDEAYNVYDKPWRDSNTLG 453

Human   445 QSIYRPSKNLDKDMYGDDLEARIKTNR 471
            ..||||||..|.|.||.||:|.:.|.|
  Fly   454 AHIYRPSKQADSDNYGGDLDAIVNTKR 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNW1NP_001305773.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46 14/44 (32%)
Interaction with PPIL1. /evidence=ECO:0000269|PubMed:16595688 59..79 17/22 (77%)
SNW 174..339 141/164 (86%)
SKIP_SNW 178..334 CDD:280827 133/155 (86%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..233 20/23 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..386 44/81 (54%)
Bx42NP_001259370.1 SKIP_SNW 181..337 CDD:280827 133/155 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159368
Domainoid 1 1.000 287 1.000 Domainoid score I1600
eggNOG 1 0.900 - - E1_KOG2441
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56557
Inparanoid 1 1.050 651 1.000 Inparanoid score I790
Isobase 1 0.950 - 0 Normalized mean entropy S1868
OMA 1 1.010 - - QHG55207
OrthoDB 1 1.010 - - D1455730at2759
OrthoFinder 1 1.000 - - FOG0005122
OrthoInspector 1 1.000 - - oto89912
orthoMCL 1 0.900 - - OOG6_102543
Panther 1 1.100 - - LDO PTHR12096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3642
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.720

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