DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB18 and Rab7

DIOPT Version :10

Sequence 1:NP_001243339.1 Gene:RAB18 / 22931 HGNCID:14244 Length:235 Species:Homo sapiens
Sequence 2:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster


Alignment Length:196 Identity:61/196 - (31%)
Similarity:102/196 - (52%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


Human     9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQTANFF 73
            ||::|:|:|.|||:||:.::.:..|..:..||||.||..|.:.|:.....:.||           
  Fly     9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIW----------- 62

Human    74 LKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETY 138
                              ||||||||::|..::||||...:||||||..::|..||:|.:|....
  Fly    63 ------------------DTAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQ 109

Human   139 CTRND---IVNMLVGNKIDKENREVDRNEGLKFAR-KHSMLFIEASAKTCDGVQCAFEELVEKII 199
            .:..|   ...:::|||:|.:||:|......::.: |:.:.:.|.|||....|:.||:.:.:..:
  Fly   110 ASPRDPDHFPFVVLGNKVDLDNRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNAL 174

Human   200 Q 200
            :
  Fly   175 E 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB18NP_001243339.1 Rab18 9..198 CDD:206656 61/192 (32%)
Rab7NP_524472.1 Rab7 9..179 CDD:206655 61/196 (31%)

Return to query results.
Submit another query.