DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB18 and Rab8

DIOPT Version :10

Sequence 1:NP_001243339.1 Gene:RAB18 / 22931 HGNCID:14244 Length:235 Species:Homo sapiens
Sequence 2:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster


Alignment Length:206 Identity:79/206 - (38%)
Similarity:117/206 - (56%) Gaps:32/206 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQTANFFL 74
            |:|:||:|||||:.:|.||::|.|:....:|||:|||::||.:|..|.||.||            
  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIW------------ 62

Human    75 KSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYC 139
                             ||||||||||:|.:|||||.|::||||:|:..:|..:.||:..:|...
  Fly    63 -----------------DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENA 110

Human   140 TRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI-IQTP 202
            :. |:..||:|||.: .:.|:|.:..|.:.|.::.:.|:|.|||....|:.||..|...| .:|.
  Fly   111 SA-DVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTE 174

Human   203 GLWESENQNKG 213
            ...|:.|..||
  Fly   175 KRMEANNPPKG 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB18NP_001243339.1 Rab18 9..198 CDD:206656 73/188 (39%)
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/191 (39%)

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