DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB18 and Rab21

DIOPT Version :10

Sequence 1:NP_001243339.1 Gene:RAB18 / 22931 HGNCID:14244 Length:235 Species:Homo sapiens
Sequence 2:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster


Alignment Length:240 Identity:78/240 - (32%)
Similarity:118/240 - (49%) Gaps:53/240 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISV-DGNKAKLAIWVTLHQQTANFF 73
            |.:::||..|||:||:||:.:|.|:.:..:|:...|..:.:|: ||.:|:|.||           
  Fly    15 KAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIW----------- 68

Human    74 LKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETY 138
                              ||||||||..|.|.||||:.|.:||||:|.||:|.|:.:|:.||. .
  Fly    69 ------------------DTAGQERFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELR-Q 114

Human   139 CTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI---- 198
            ....:|..::||||.| :|.|.|..:|.|::||.....::|.|||..:||...||.|.:.:    
  Fly   115 MRGTEIALIIVGNKTDLEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLEQL 179

Human   199 -----------IQTPGLWESENQNKGVKLSHREEGQGGG---ACG 229
                       :|.|   :::|.|........:.|...|   .||
  Fly   180 SQRQPDASPLRLQNP---DTDNLNNSDDSEAPDPGDPAGQRSCCG 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB18NP_001243339.1 Rab18 9..198 CDD:206656 70/189 (37%)
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 70/190 (37%)

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