DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DHX30 and bgcn

DIOPT Version :9

Sequence 1:XP_011531792.1 Gene:DHX30 / 22907 HGNCID:16716 Length:1265 Species:Homo sapiens
Sequence 2:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster


Alignment Length:1027 Identity:225/1027 - (21%)
Similarity:365/1027 - (35%) Gaps:320/1027 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   400 MYNLASLRELGETQRRPCTIQVPEPILRKIETFLNHYPVESSWIAPELRLQSDDILPLGK----- 459
            :|.||..|   ..|:.|||.:..|.     |.|.|:        |..|.|:|..:...|.     
  Fly    15 LYFLAGRR---CCQQFPCTFRTSEH-----EAFANN--------ARSLGLRSQVVHVNGNSCVKV 63

Human   460 -----------------DSGPLSDPITGKPYVPLLEAEEVRLSQSL--------------LELWR 493
                             .||...:..|......|:..|::.|...|              |.|..
  Fly    64 YKQACRHYLEEPKTLVLSSGATLNMFTLLSRKSLMGKEDLELYADLVSMKANASDLPSLHLPLPA 128

Human   494 RRGP---VWQEAPQLPV------DPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTE 549
            .|.|   .|.|| ||..      ....|.||.::....|:|.:......|:..:|.::|:    :
  Fly   129 IRPPNLRFWTEA-QLNFLTAFLGHSLSDEILQSLYASRVIVYNAALCWDKSVFLPLVILD----D 188

Human   550 GRGARCNVII--TQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILL 612
            .|..:.||.|  .:.:.|.|...:||.::..|..|...||.|:...| ..|....:::.|....|
  Fly   189 CRNKKSNVKIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFS-AVSSSTFIIYSTAQYFL 252

Human   613 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFG-- 675
            |.|.|. ....:||::|::||..|..||.||..::.....:..||:||:|..|:.::|:.:||  
  Fly   253 RSLTSQ-QFRNISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEG 316

Human   676 -GCPVIKVP-------------------------------------------------------- 683
             ...:||.|                                                        
  Fly   317 LQLNMIKQPEVAPRVSYLNELHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELG 381

Human   684 ------GFMYPVK--------------------------------------EHYLEDIL------ 698
                  .|:|.|.                                      :.|:.|:.      
  Fly   382 TDAALRPFLYAVNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAIS 446

Human   699 --AKLGKHQ---YLHRHRHH----ESEDECALDLDLVTDLVLHIDARGE-------PGGILCFLP 747
              |..|.|:   .|:.:..|    :|.....:|.||:.|::..:..:.|       ||.||..||
  Fly   447 LAAMNGNHECIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILP 511

Human   748 GWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIF----------QQPPVGVR----KI 798
            .:..|.             :..|:||. |.....:.:.:||          .|..|...    |:
  Fly   512 TYYHIV-------------KLNYMILS-HCLTGSLQECSIFLLYDNMRNDYLQALVNASDETVKV 562

Human   799 VLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL---ETVWVSRANVIQR----RGRAGR 856
            ||||:|.|:........:.:|:.......||   ..||.   ...||::..:::|    :...|.
  Fly   563 VLATDIIESLCLKVPFKYQIDTACRLNNVYD---TTSCSGDDRFEWVAKDALLRRELILQPNKGD 624

Human   857 CQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDE 921
            .|   .:.|..:...|::.....|.:....|:.:.|..|:..|.....|:|...:..|.:..|..
  Fly   625 VQ---CFRLISKEAYEELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHH 686

Human   922 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCL-TRD----P 981
            ||..|::|.|||..|.:|.||.||..|....:|.:.::...:.|||.|:|.:||.| |.|    |
  Fly   687 AVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIP 751

Human   982 FSSSLQN---------RAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSREN---YLE 1034
            |:..:.|         :..:.|.:..||.:..|||..|||.   ::|   ||:|.....   ||:
  Fly   752 FTEDIDNLWDRFTIYIQNSIKKERTYLSDNQFSDHFIFVRL---YKE---WQNRMHNRTPPLYLK 810

Human  1035 ENLLYAPSLRFIHGLIKQFS-------ENIYEAFLV---GKPSDCTLASAQCNEYSEEEELVKGV 1089
            :...:     .::||::|.:       .::..|.|:   ||.|...|....||.:     :||..
  Fly   811 DEYEF-----MLNGLMEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWH-----MVKAA 865

Human  1090 LMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINRE--------ATRLRSRWLT 1146
            |..|:|||:..|...|.:.:..|          |||:.:|.:|:.|:        |...|:.|: 
  Fly   866 LTGGMYPNIYAVDTRKSSLKSAF----------SGNVSMHPNTVLRDFLEPLNISAQSFRTPWI- 919

Human  1147 YFMAVKSNGSVFVRDSSQVHPLAVLL------------------LTDGDVHI 1180
                |.:.....:..::.|.||||.:                  |||.:|::
  Fly   920 ----VCNRQKSHIVYATLVVPLAVAMFSGHPRIRLSPICDSEMSLTDRNVNV 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DHX30XP_011531792.1 HrpA 494..>1143 CDD:224557 188/840 (22%)
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 1/31 (3%)
ANK 407..>460 CDD:238125 5/52 (10%)
Ank_2 413..>460 CDD:289560 5/46 (11%)
HrpA <484..973 CDD:224557 128/535 (24%)
HA2 694..763 CDD:214852 25/68 (37%)
OB_NTP_bind 823..945 CDD:285018 34/141 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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