DRSC/TRiP Functional Genomics Resources

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Protein Alignment RHOBTB3 and Rac1

DIOPT Version :9

Sequence 1:NP_055714.3 Gene:RHOBTB3 / 22836 HGNCID:18757 Length:611 Species:Homo sapiens
Sequence 2:NP_001261247.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster


Alignment Length:199 Identity:46/199 - (23%)
Similarity:80/199 - (40%) Gaps:43/199 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    34 LVSGDES---SLLLNAASTVARP------VFTEYQASAFGNVKLVVHDCPVWDIFDSDWYTSRNL 89
            :|.||.:   :.||.:.:|.|.|      ||..|.|:...:.|.:  :..:||....:.|.....
  Fly     7 VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPI--NLGLWDTAGQEDYDRLRP 69

Human    90 IG--GADIIVIKYNVNDKFSFHEVKDNYIPVIKRALNSVPVIIAAVGT--------------RQN 138
            :.  ..|:.:|.:::.:..||..|:..:.|.::....|.|:|:  |||              |..
  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIIL--VGTKLDLRDDKNTIEKLRDK 132

Human   139 EELPCTCPLCTSDRGSCVSTTEGIQLAKELGAT-YLELHSLDDFYIGKYFGGVLEYFMIQALNQK 202
            :..|.|.|             :|:.:|||:||. |||..:|....:...|...:...:...|..|
  Fly   133 KLAPITYP-------------QGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLCPVLQPK 184

Human   203 TSEK 206
            :..|
  Fly   185 SKRK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOBTB3NP_055714.3 Rho-like 1..175 40/166 (24%)
P-loop_NTPase 34..174 CDD:304359 39/165 (24%)
BTB 413..515 CDD:279045
Interaction with Rab9 420..611
BTB 421..518 CDD:197585
Rac1NP_001261247.1 Rac1_like 3..176 CDD:206663 43/185 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24072
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.000

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