DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PUF60 and prp2

DIOPT Version :9

Sequence 1:NP_001349824.1 Gene:PUF60 / 22827 HGNCID:17042 Length:596 Species:Homo sapiens
Sequence 2:NP_595396.1 Gene:prp2 / 2539645 PomBaseID:SPBC146.07 Length:517 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PUF60NP_001349824.1 half-pint 44..596 CDD:130706
prp2NP_595396.1 U2AF_lg 22..517 CDD:273727
RRM_SF 198..279 CDD:302621
RRM_SF 310..381 CDD:302621
RRM3_U2AF65 417..505 CDD:240678
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51929
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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