| Sequence 1: | NP_001349824.1 | Gene: | PUF60 / 22827 | HGNCID: | 17042 | Length: | 596 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_491176.1 | Gene: | rnp-6 / 171922 | WormBaseID: | WBGene00004389 | Length: | 749 | Species: | Caenorhabditis elegans |
| Alignment Length: | 747 | Identity: | 256/747 - (34%) |
|---|---|---|---|
| Similarity: | 342/747 - (45%) | Gaps: | 254/747 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Human 73 PQGTDSIKMENGQSTAAK--LGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNL 135
Human 136 QMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD 200
Human 201 SVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGR--------PSNIGQAQPIIDQLAE 257
Human 258 EARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 322
Human 323 SMNLFDLGGQYLRVGKAVTPP--MPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAA--VLG 383
Human 384 TLGTPGLVSP---ALTLAQPLGTLP-----QAVMAA---------------QAPGVITG------ 419
Human 420 -----VTPARPPIPVTI-PSVGVVNPILASPP--------------------------------- 445
Human 446 --------------------------------------------------TLG------------ 448
Human 449 -----------------------------------------------------LLEPKKEKEEEE 460
Human 461 -------------LFPESERPEM---------------LSEQEHMSISGSSARHMVMQKLLRKQE 497
Human 498 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQ-EKQGEEEDAEIIVKIFVEFSIASE 561
Human 562 THKAIQALNGRWFAGRKVVAEVYDQERFDNSD 593 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| PUF60 | NP_001349824.1 | half-pint | 44..596 | CDD:130706 | 256/747 (34%) |
| rnp-6 | NP_491176.1 | half-pint | 5..749 | CDD:130706 | 256/747 (34%) |
| RRM1_PUF60 | 102..177 | CDD:240816 | 52/74 (70%) | ||
| RRM2_PUF60 | 207..283 | CDD:240817 | 44/75 (59%) | ||
| RRM_SF | 657..748 | CDD:302621 | 48/97 (49%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C161470948 | |
| Domainoid | 1 | 1.000 | 111 | 1.000 | Domainoid score | I4337 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H8614 | |
| Inparanoid | 1 | 1.050 | 407 | 1.000 | Inparanoid score | I1200 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG51929 | |
| OrthoDB | 1 | 1.010 | - | - | D438205at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0005543 | |
| OrthoInspector | 1 | 1.000 | - | - | oto21171 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_104067 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR47330 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4280 |
| SonicParanoid | 1 | 1.000 | - | - | X3961 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.940 | |||||