DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COPZ1 and zetaCOP

DIOPT Version :10

Sequence 1:NP_001258665.1 Gene:COPZ1 / 22818 HGNCID:2243 Length:185 Species:Homo sapiens
Sequence 2:NP_648910.1 Gene:zetaCOP / 39862 FlyBaseID:FBgn0040512 Length:174 Species:Drosophila melanogaster


Alignment Length:166 Identity:104/166 - (62%)
Similarity:145/166 - (87%) Gaps:1/166 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    21 VKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEIALLEGLTVVYKSSIDLY 84
            :|.:.|:||||:|:.||||| :...::|||||||||:||||||:::||.:|:|||.||||::||:
  Fly     9 IKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYKSNVDLF 73

Human    85 FYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQ 149
            |||:|::|||||:|::|||||:||:|.:|:||||||.:|||:|.:.||.|||.|||:||::||..
  Fly    74 FYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGIILDADPSS 138

Human   150 VVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR 185
            ||.||.||.:|:|:.||||:||||||:||:|||:|:
  Fly   139 VVKRVDLRNDDIPIAEQTVAQVLQSAREQLKWSILK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COPZ1NP_001258665.1 Zeta-COP 22..153 CDD:341433 82/131 (63%)
zetaCOPNP_648910.1 Zeta-COP 10..142 CDD:341433 82/131 (63%)

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