DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFEC and RTG3

DIOPT Version :10

Sequence 1:XP_011514265.1 Gene:TFEC / 22797 HGNCID:11754 Length:437 Species:Homo sapiens
Sequence 2:NP_009447.1 Gene:RTG3 / 852171 SGDID:S000000199 Length:486 Species:Saccharomyces cerevisiae


Alignment Length:353 Identity:85/353 - (24%)
Similarity:137/353 - (38%) Gaps:107/353 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    58 SSQLPSFTRVPAHLESSA-------------RPQLQKAQRQKVNSFMTLDHQIINPTLKWSQPAV 109
            :||.|:.:.:....||.:             ||..|       ||..::....:.     |..::
Yeast    86 NSQTPTASTIYEEAESQSSYLDDMFRTSQGGRPVTQ-------NSISSIGQGPLR-----SSYSM 138

Human   110 PSGGPLVQHAHTTLDSDAGL-TENPLTKLLAIGKEDDNAQWHMEDVIEDIIGMESSFKEEGADSP 173
            ....|:.:..:|.|....|| .|.|...|...|.:|.     |.::.:|:    ||......:|.
Yeast   139 AYDSPVDRAMNTPLQQQEGLKAELPHDFLFQHGTDDT-----MYNLTDDL----SSSLSSSINSD 194

Human   174 LLMQRTLSGSILDVYSGEQGISPINMGLTSAS--------CPSS------------------LPM 212
            ::...|        ||.....:|.::|..|.|        .|||                  .|.
Yeast   195 MMTPNT--------YSSSFSYNPQSLGPASVSSTYSPKVRSPSSSFRAGSFLSSSFRHGSINTPR 251

Human   213 KR--EITETDTRALA---------------KERQKKDNHNLIERRRRYNINYRIKELGTLIPKS- 259
            .|  .|:...|..:.               |.|:|::.||.:|||||..|..:|||||.|:|.| 
Yeast   252 TRHTSISSNMTENIGPGSVPKILGGLTSDEKLRRKREFHNAVERRRRELIKQKIKELGQLVPPSL 316

Human   260 -NDPDM----RWNKGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQART 319
             |..|:    :.|||.||..:|||:::|.:    ..|::.|:||      .||.:|:|||.:.  
Yeast   317 LNYDDLGKQIKPNKGIILDRTVEYLQYLAE----ILEIQARKKK------ALLAKIKELEEKK-- 369

Human   320 HGLPTLASLGTVDLGAHVTKQQSHPEQN 347
               .::|:|.......|.:..|::.|.:
Yeast   370 ---SSVAALSPFTNNHHASSGQNNSENS 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFECXP_011514265.1 bHLHzip_TFEC 226..310 CDD:381495 36/89 (40%)
DUF3371 315..434 CDD:463372 5/33 (15%)
RTG3NP_009447.1 bHLHzip_USF_MITF 289..349 CDD:381393 27/63 (43%)

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