DRSC/TRiP Functional Genomics Resources

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Protein Alignment NID2 and arr

DIOPT Version :10

Sequence 1:XP_005267462.1 Gene:NID2 / 22795 HGNCID:13389 Length:1402 Species:Homo sapiens
Sequence 2:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster


Alignment Length:213 Identity:92/213 - (43%)
Similarity:128/213 - (60%) Gaps:6/213 - (2%)


- Green bases have known domain annotations that are detailed below.


Human  1172 VGIDYDCRERMVYWTDVAGRTISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMYWTDSVLDK 1236
            :.||||..|..:||:||...||.||..: |......|.|.:..|:|||:|.:.|.:||||:|.|:
  Fly   437 IAIDYDPVEEHIYWSDVETYTIKRAHAD-GTGVTDFVTSEVRHPDGLALDWLARNLYWTDTVTDR 500

Human  1237 IESALLDGSERKVLFYTDLVNPRAIAVDPIRGNLYWTDWNREAPKIETSSLDGENRRILINTDIG 1301
            ||...|||:.||||.|..|..||||||.|..|.::|:|||...||:|.:||||..|.:|::.::|
  Fly   501 IEVCRLDGTAR
KVLIYEHLEEPRAIAVAPSLGWMFWSDWNERKPKVERASLDGSERVVLVSENLG 565

Human  1302 LPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRR-VIQNNLKYPFSIVSYADHFYHTDWRRDGV 1365
            .|||:..|..:|.:.|.|..|.|:|....||:||| ||.:|||:.|.:....|:.|.|||:|..:
  Fly   566 WPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVISDNLKHLFGLSILDDYLYWTDWQRRSI 630

Human  1366 VSVNKHSGQ----FTDEY 1379
            ...:|.:|.    ..|:|
  Fly   631 DRAHKITGNNRIVVVDQY 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NID2XP_005267462.1 NIDO 108..273 CDD:214712
EGF_3 515..550 CDD:463759
G2F 552..784 CDD:214774
EGF_3 790..826 CDD:463759
EGF_CA 828..870 CDD:214542
EGF_3 879..917 CDD:463759
EGF_3 923..956 CDD:463759
TY 966..1032 CDD:238114
TY 1046..1111 CDD:238114
LY 1161..1199 CDD:214531 13/26 (50%)
LY 1205..1247 CDD:214531 19/41 (46%)
LY 1248..1292 CDD:214531 24/43 (56%)
LY 1293..1335 CDD:214531 14/41 (34%)
arrNP_524737.2 LY 162..201 CDD:214531
NHL 168..503 CDD:302697 29/66 (44%)
NHL repeat 172..237 CDD:271320
LY 252..293 CDD:214531
NHL repeat 261..298 CDD:271320
NHL repeat 303..339 CDD:271320
NHL repeat 341..419 CDD:271320
NHL repeat 428..476 CDD:271320 16/39 (41%)
LY 472..511 CDD:214531 19/38 (50%)
NHL repeat 477..503 CDD:271320 13/25 (52%)
Ldl_recept_b 534..574 CDD:459654 17/39 (44%)
LY 558..599 CDD:214531 14/40 (35%)
LY 600..641 CDD:214531 15/40 (38%)
FXa_inhibition 668..703 CDD:464251
YncE <736..886 CDD:442618
LY 776..818 CDD:214531
LY 905..946 CDD:214531
FXa_inhibition 973..1010 CDD:464251
YncE <1047..1191 CDD:442618
LDLa 1319..1362 CDD:238060
LDLa 1365..1399 CDD:238060
LDLa 1399..1433 CDD:197566
Blue background indicates that the domain is not in the aligned region.

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