DRSC/TRiP Functional Genomics Resources

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Protein Alignment FHL2 and smash

DIOPT Version :10

Sequence 1:NP_001441.4 Gene:FHL2 / 2274 HGNCID:3703 Length:279 Species:Homo sapiens
Sequence 2:NP_001246912.1 Gene:smash / 40583 FlyBaseID:FBgn0263346 Length:1541 Species:Drosophila melanogaster


Alignment Length:70 Identity:17/70 - (24%)
Similarity:26/70 - (37%) Gaps:13/70 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    40 CEECGKPIGCDCKDLSYKDR---------HWHEACFHCSQCRNSLVD----KPFAAKEDQLLCTD 91
            |..||..:|..|..:..:..         .:|..||.|..|...|.|    .....:..:|.|.:
  Fly  1464 CSHCGDELGKLCYYVGCRGAAMIIESLLLFYHINCFKCCVCHVQLGDGLNGTDVRVRNHKLHCQN 1528

Human    92 CYSNE 96
            |||::
  Fly  1529 CYSSD 1533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FHL2NP_001441.4 LIM <5..33 CDD:413332
LIM1_FHL2 36..97 CDD:188806 17/70 (24%)
LIM2_FHL2 101..157 CDD:188810
LIM3_Fhl2 162..218 CDD:188815
LIM4_FHL2 221..278 CDD:188817
smashNP_001246912.1 DUF4757 <47..153 CDD:464950
PAT1 <1159..>1335 CDD:401645
LIM <1494..1530 CDD:395333 9/35 (26%)
Blue background indicates that the domain is not in the aligned region.

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