DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FHL1 and pk

DIOPT Version :9

Sequence 1:XP_006724806.1 Gene:FHL1 / 2273 HGNCID:3702 Length:339 Species:Homo sapiens
Sequence 2:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster


Alignment Length:224 Identity:61/224 - (27%)
Similarity:95/224 - (42%) Gaps:27/224 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    74 NRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVW 138
            |..||..||.|:.|...|.:..:..:|.::.|.:.......|:|..|.:.|:| |:..|.:|..|
  Fly   646 NASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHA
ETLKPRCSACDEIILA-DECTEAEGRAW 709

Human   139 HKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAI--TSGGITYQDQPWHA-- 199
            |.:.|.|..|.:.:|...:..:....||:.|.:..||::|..|.:||  ..|.:::..|.|||  
  Fly   710 HMNHFACHECDKQLGGQRYIMREGKPYCLHCFD
AMFAEYCDYCGEAIGVDQGQMSHDGQHWHATD 774

Human   200 DCFVCVTCSKKLAGQRFTAVEDQYYC-VDCYKNFVAKKCAGCKNPIT-----GKRTVSRVSHPVS 258
            :||.|.||...|.|:.|.......|| :.|.|.          .|.|     |....:..:.|..
  Fly   775 ECFSCNTCRCSLLGRAFLPRRGAIYCSIACSKG----------EPPTPSDSSGTGMYTTPTPPTQ 829

Human   259 KARKPPVCHGKRLPL-TLFPSANLRGRHP 286
            :.|..|     :.|| ...||::.....|
  Fly   830 RVRPHP-----QAPLPARIPSSHASSSPP 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FHL1XP_006724806.1 LIM <21..49 CDD:413332
LIM1_FHL1 56..109 CDD:188730 10/34 (29%)
LIM2_FHL1 117..174 CDD:188808 16/56 (29%)
LIM3_FHL1 178..230 CDD:188813 20/56 (36%)
pkNP_724538.1 PET_Prickle 523..618 CDD:193602
LIM1_Prickle 624..682 CDD:188799 10/35 (29%)
LIM2_Prickle 687..742 CDD:188802 17/55 (31%)
LIM3_Prickle 747..805 CDD:188804 19/57 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.