DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FHL1 and pxl1

DIOPT Version :10

Sequence 1:NP_001427698.1 Gene:FHL1 / 2273 HGNCID:3702 Length:339 Species:Homo sapiens
Sequence 2:NP_596112.1 Gene:pxl1 / 2540856 PomBaseID:SPBC4F6.12 Length:438 Species:Schizosaccharomyces pombe


Alignment Length:229 Identity:56/229 - (24%)
Similarity:90/229 - (39%) Gaps:40/229 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASHRHSGPSSYKVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGA 65
            ::||..:.|..|:..  :|| .||.|...|:..:.                           |.|
pombe   239 VSSHTSTKPVLYRGN--SEK-SCHSCGGSLRAGRI---------------------------ISA 273

Human    66 DSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQN 130
            ..|::       |..||:|..|...|.:..|..::.|..|:.....:.||:||.|...|  .||.
pombe   274 SGKKL-------HPQCFKCDTCSQNLEHVGFYYREGKFYCHLDYHEQFSPRCKHCKTPI--EDQA 329

Human   131 VEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFY-CVTCHETKFAKHCVKCNKAITSGGITYQD 194
            |......:|::...|:.|.:|..........:|.| |.||::.|:|..|.||.|.|....:...|
pombe   330 VHINNDWFHENHHFCAGCSEVFNVNIPCIYRDDLYWCQTCYDNKYAVKCKKCRKPILGISVKGSD 394

Human   195 QPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDC 228
            ..:|:.|:.|..|:..|..:.:..:|:...|..|
pombe   395 GEYHSQCWTCGACNALLGDEGYFMIENTPICRPC 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FHL1NP_001427698.1 None
pxl1NP_596112.1 LIM 258..314 CDD:395333 16/89 (18%)
LIM 318..370 CDD:259829 15/53 (28%)
LIM 378..428 CDD:259829 13/49 (27%)

Return to query results.
Submit another query.