DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zfp39 and CG4360

DIOPT Version :9

Sequence 1:NP_035888.2 Gene:Zfp39 / 22698 MGIID:99183 Length:718 Species:Mus musculus
Sequence 2:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster


Alignment Length:448 Identity:124/448 - (27%)
Similarity:181/448 - (40%) Gaps:123/448 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse   375 PREARLWEVYQSENSFGEKPNLRRYQRTRAGYKPYGCNLCGKAFYRKSHLGRHQKIHTGEKPYGC 439
            |.:..:..|...|....:.|..::.           |::|...|.:.:.|..|.||||.|:||.|
  Fly   119 PMKQEVQSVISEEEVVVDDPRKKKQ-----------CHVCKNKFRQLTTLRNHMKIHTDERPYKC 172

Mouse   440 EECKKTFYHKSSLTIHQRTHTGEKPYECKKCRKTFYCKSDLNVHHRTH----------------- 487
            :.|.|.|...|:||.|.:.||||||:.|..|.|.|..:|.|..|.:||                 
  Fly   173 KHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQ 237

Mouse   488 TGEKPYECDECRKTFYSKSH--LVIHQKVHTGD----------KPYECEECQKAFSRKSNLTVHQ 540
            ||...:...:..:. |.:.|  :.|.:.:::|.          ||::|..|::.|.:.|.|..|:
  Fly   238 TGSGKHRKSQMHQA-YQQQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHNHE 301

Mouse   541 KTHTGEKPYECNVCGKTFHRQSHLNMHQGTHTGQKPYQCEECGKAFYQKSSLRRHQRNHTGS--- 602
            :||...|||:|..|.|:|.:.:.|..|:..|||.|||.|..|...|.|:|:|..|.:.||..   
  Fly   302 RTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAP 366

Mouse   603 ----------------------RPYACEECRKTF------LHKSSLTVHQRSH------------ 627
                                  .|.|....:.|.      ||.|:..:.|..|            
  Fly   367 GGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDGSTT 431

Mouse   628 -----------------------TGY----------------KPYSCEECRKTFYSKSHLTVHQR 653
                                   :|.                :|:.|..|::.|..:|.|..|.:
  Fly   432 VSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIK 496

Mouse   654 THTGEKPYECKLCKKAFHQKSYLNRHQVTHGSEKRFECQECRKTFYHKSSLTVHQRIH 711
            ||||||||:||:|:..|.|.:.||.|...|..||.:.|..|.|.|..||:|..|.|:|
  Fly   497 THTGEKPYKCKICEVNFRQVATLNNHMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVH 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfp39NP_035888.2 KRAB 59..118 CDD:214630
KRAB 59..98 CDD:279668
C2H2 Zn finger 300..320 CDD:275368
C2H2 Zn finger 328..347 CDD:275368
C2H2 Zn finger 355..374 CDD:275370
COG5048 407..699 CDD:227381 113/402 (28%)
C2H2 Zn finger 411..431 CDD:275368 6/19 (32%)
C2H2 Zn finger 439..459 CDD:275368 8/19 (42%)
zf-H2C2_2 451..474 CDD:290200 12/22 (55%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
zf-H2C2_2 479..502 CDD:290200 6/39 (15%)
C2H2 Zn finger 495..515 CDD:275368 3/21 (14%)
zf-H2C2_2 507..532 CDD:290200 8/36 (22%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
zf-H2C2_2 535..560 CDD:290200 11/24 (46%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
zf-H2C2_2 563..586 CDD:290200 10/22 (45%)
C2H2 Zn finger 579..599 CDD:275368 7/19 (37%)
zf-H2C2_2 591..616 CDD:290200 7/55 (13%)
C2H2 Zn finger 607..627 CDD:275368 5/25 (20%)
C2H2 Zn finger 635..655 CDD:275368 6/19 (32%)
zf-H2C2_2 647..672 CDD:290200 14/24 (58%)
C2H2 Zn finger 663..683 CDD:275368 8/19 (42%)
C2H2 Zn finger 691..711 CDD:275368 9/19 (47%)
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
zf-H2C2_2 157..181 CDD:290200 13/23 (57%)
C2H2 Zn finger 172..192 CDD:275368 8/19 (42%)
zf-H2C2_2 185..209 CDD:290200 13/23 (57%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
C2H2 Zn finger 284..304 CDD:275368 6/19 (32%)
zf-C2H2_8 287..363 CDD:292531 31/75 (41%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
zf-H2C2_2 491..515 CDD:290200 14/23 (61%)
C2H2 Zn finger 506..526 CDD:275368 8/19 (42%)
zf-H2C2_2 519..543 CDD:290200 10/23 (43%)
C2H2 Zn finger 534..554 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.