DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfp35 and CG2889

DIOPT Version :9

Sequence 1:NP_035885.2 Gene:Zfp35 / 22694 MGIID:99179 Length:580 Species:Mus musculus
Sequence 2:NP_001245615.1 Gene:CG2889 / 31977 FlyBaseID:FBgn0030206 Length:581 Species:Drosophila melanogaster


Alignment Length:418 Identity:105/418 - (25%)
Similarity:148/418 - (35%) Gaps:80/418 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 SDGETKIKIGEPATEEE-------------MTGKIGTVTEESG-----SLEEDVPH--DSRGKEF 60
            ||.|.::..|:|.:|.:             |..|..|....|.     ||::::..  |..||..
  Fly   162 SDSEPEVTEGQPESESDSSDDEPLVRLKSKMKPKRKTSARSSKDQGPISLQQELADLLDDGGKRR 226

Mouse    61 RE---------FGEELNDQMLFRRR---------------------QYNCDECDQSFAWSTGLIR 95
            |.         ..:|...|.:..|:                     ..:||.|:.|..:.:.|..
  Fly   227 RRKAPDQRTTTESQESELQAVLERKPKGCSRAQLAKSYEKAIASYMSASCDLCEFSAPYLSELKT 291

Mouse    96 H-QRTHWKPYECEECGKAFRMSSALVLHQRIHTGEKPYPCSWCIKSFSRSSDLIKH-QRVHTGEK 158
            | ...|.:.|..:.|||.|..:|.|:.|.|.|...|.:.|:.|.||.:....|..| :.||.   
  Fly   292 HFLEVHQREYYIKCCGKVFTRASKLMDHIRKHINPKLFTCTICKKSLNSQDYLATHIETVHN--- 353

Mouse   159 PYKCDECGKAFSQSSDLMIHQRIHTGEKPYQCSHCSKSFSQHSGMVKHLRIH-TGEKPYMCNHCY 222
              |..:.||...                 :.|..|.::||....|..||..| |.:..:.|..|.
  Fly   354 --KVAQIGKVLK-----------------FPCPKCERTFSSERRMANHLAKHDTDQLEHTCEICC 399

Mouse   223 KHFSQSSDLIKH-QRIHTGEKPYKCDVCGKAFSQSSDRILHQRIHTG--EKPYPCAQCNKSFSQN 284
            |.|:....|.:| |.||.....:.||:|||.|........|...|.|  .....|..|.......
  Fly   400 KSFANVHRLRRHIQSIHEDLHRHVCDICGKKFKFKPSFERHLLEHQGVVAPAVECPICRVWLKNE 464

Mouse   285 SDLIKHRRIHTGEKPYKCSECGKAFNQSSVLILHQR-IHTGEKPYPCNQCTKSFSRLSDLINHQR 348
            ..|..||..|...... |..|||.....:.|..|.: .|.......|..|.|:|.:..:|..|..
  Fly   465 HSLRLHRFTHDSTDTV-CPHCGKTCTSRTALRGHVKYAHKLTTNLQCTFCEKTFKQQRNLDEHMA 528

Mouse   349 IHTGEKPYPCSQCSKMFSRRSDLVKHYR 376
            ||||.:.|.|..|.|....||::..|.:
  Fly   529 IHTGLQLYNCPHCPKECRSRSNMYVHIK 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfp35NP_035885.2 C2H2 Zn finger 80..100 CDD:275368 6/20 (30%)
COG5048 102..489 CDD:227381 79/281 (28%)
C2H2 Zn finger 106..126 CDD:275368 8/19 (42%)
C2H2 Zn finger 134..154 CDD:275368 6/20 (30%)
C2H2 Zn finger 162..182 CDD:275368 2/19 (11%)
C2H2 Zn finger 190..210 CDD:275368 7/19 (37%)
C2H2 Zn finger 218..238 CDD:275368 7/20 (35%)
C2H2 Zn finger 246..266 CDD:275368 7/19 (37%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
C2H2 Zn finger 302..322 CDD:275368 6/20 (30%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368
C2H2 Zn finger 414..434 CDD:275368
C2H2 Zn finger 442..462 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
C2H2 Zn finger 498..518 CDD:275368
C2H2 Zn finger 526..545 CDD:275368
zf-H2C2_2 541..562 CDD:404364
C2H2 Zn finger 553..573 CDD:275368
CG2889NP_001245615.1 zf-AD 2..79 CDD:285071
C2H2 Zn finger 276..297 CDD:275368 6/20 (30%)
C2H2 Zn finger 306..323 CDD:275368 8/16 (50%)
C2H2 Zn finger 331..352 CDD:275368 6/20 (30%)
C2H2 Zn finger 366..386 CDD:275368 7/19 (37%)
C2H2 Zn finger 395..416 CDD:275368 7/20 (35%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..502 CDD:275368 6/20 (30%)
C2H2 Zn finger 510..530 CDD:275368 6/19 (32%)
C2H2 Zn finger 538..556 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S12372
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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