DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zfand5 and Rabex-5

DIOPT Version :9

Sequence 1:NP_033577.1 Gene:Zfand5 / 22682 MGIID:1278334 Length:213 Species:Mus musculus
Sequence 2:NP_612093.1 Gene:Rabex-5 / 38144 FlyBaseID:FBgn0262937 Length:696 Species:Drosophila melanogaster


Alignment Length:130 Identity:35/130 - (26%)
Similarity:55/130 - (42%) Gaps:19/130 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse    14 CSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNS--PTSDSASVQRADAGLNNC 76
            |.:||||||.|:..|:||:|::|....:|...:.:...|..||:|  .|.|..|.|.|.      
  Fly    19 CRSGCGFYGTPQNEGLCSMCFR
EKFNDKQRKLKQTGGETGPGSSSSVATLDRRSPQHAH------ 77

Mouse    77 EGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITT--PKT-EVSEPVVTQPSPSVSQPSSSQ 138
              ..|...::.|.      |..::...:...::.|.|.  .|| :.....:||....|..|:..|
  Fly    78 --LQGKVEQQVRK------PSDKEQDNLGTLQKKKFTAVLQKTLQAGAQKITQQRGHVPDPTEGQ 134

Mouse   139  138
              Fly   135  134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfand5NP_033577.1 zf-A20 12..35 CDD:366793 12/20 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..149 22/105 (21%)
ZnF_AN1 154..191 CDD:197545
Rabex-5NP_612093.1 zf-A20 17..40 CDD:280010 12/20 (60%)
VPS9 274..373 CDD:280383
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3173
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.