DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FGR and BEM1

DIOPT Version :9

Sequence 1:NP_001036194.1 Gene:FGR / 2268 HGNCID:3697 Length:529 Species:Homo sapiens
Sequence 2:NP_009759.3 Gene:BEM1 / 852499 SGDID:S000000404 Length:551 Species:Saccharomyces cerevisiae


Alignment Length:532 Identity:96/532 - (18%)
Similarity:174/532 - (32%) Gaps:192/532 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    14 TAKEDAGLEGDFRSYGAAD----HYGPDPT----------------KARPASSFAHIPNYSNFSS 58
            |:||.:.:||:| .|.:.|    :...:|:                :.:|:|     .|.||.||
Yeast    87 TSKELSFMEGEF-FYVSGDEKDWYKASNPSTGKEGVVPKTYFEVFDRTKPSS-----VNGSNSSS 145

Human    59 QAINPGFLDSGTIRGVSGIGVTLFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSS- 122
            :.:....|:.|::..         |.|||::|...|:||...||...|..:...:|:.|:.:.. 
Yeast   146 RKVTNDSLNMGSLYA---------IVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRL 201

Human   123 GKTGCIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDW 187
            |..|.:|..:|:.:|                     ::.|...|..:|   |..|.....::::|
Yeast   202 GGPGLVPVGFVSIID---------------------IATGYATGNDVI---EDIKSVNLPTVQEW 242

Human   188 DQTRGDHVKHYKIRKLDMGG-----------------------------------------YYIT 211
            .    .::..||...:.:|.                                         :.:.
Yeast   243 K----SNIARYKASNISLGSVEQQQQQSITKPQNKSAKLVDGELLVKASVESFGLEDEKYWFLVC 303

Human   212 TRVQFNSVQELVQHYMEVNDGLCNLLIAPCTIMKPQTLGLAKDAWEISRSSITLERRLGTGCFGD 276
            ..:.....::|.::|.:..|....||.|     .|...|..:||.                    
Yeast   304 CELSNGKTRQLKRYYQDFYDLQVQLLDA-----FPAEAGKLRDAG-------------------- 343

Human   277 VWLGTWNGSTKVAVKTLKPGTMSPKAFLEEAQVMKLLRHDKLVQLYAVVSEEPIYIVTEFMCHGS 341
               |.|:       |.:.|....|..::..:...|  |.:.|....|.:...|.||....|.|..
Yeast   344 ---GQWS-------KRIMPYIPGPVPYVTNSITKK--RKEDLNIYVADLVNLPDYISRSEMVHSL 396

Human   342 LL--------DFLKNPEGQDLRLPQLVDMAAQVAEGMAYMERMNY--IHRDLRAANILVGE--RL 394
            .:        :|.::....:::..|..|.|......    :..|:  .::|    |.|.||  :|
Yeast   397 FVVLNNGFDREFERDENQNNIKTLQENDTATFATAS----QTSNFASTNQD----NTLTGEDLKL 453

Human   395 ACKIADFGLARLIKDDEYNPCQGSKFPIKWTAPEAALFG------RFTIKSDVWSFGILLTELIT 453
            ..|::|..|:            |||     .||..:..|      :|..|.|:::       |:.
Yeast   454 NKKLSDLSLS------------GSK-----QAPAQSTSGLKTTKIKFYYKDDIFA-------LML 494

Human   454 KGRIPYPGMNKR 465
            ||...|..:..:
Yeast   495 KGDTTYKELRSK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FGRNP_001036194.1 SH3 80..137 CDD:327375 17/57 (30%)
SH2_Src_Fgr 140..240 CDD:198230 14/140 (10%)
PKc_like 267..514 CDD:328722 41/217 (19%)
BEM1NP_009759.3 SH3_Bem1p_1 76..127 CDD:212811 9/40 (23%)
SH3_Bem1p_2 159..214 CDD:212812 17/63 (27%)
PX_Bem1p 284..400 CDD:132800 24/152 (16%)
PB1 478..549 CDD:214770 7/36 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I3374
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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