DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FGR and yrk

DIOPT Version :9

Sequence 1:NP_001036194.1 Gene:FGR / 2268 HGNCID:3697 Length:529 Species:Homo sapiens
Sequence 2:NP_001352482.1 Gene:yrk / 337571 ZFINID:ZDB-GENE-030131-9517 Length:528 Species:Danio rerio


Alignment Length:534 Identity:373/534 - (69%)
Similarity:432/534 - (80%) Gaps:15/534 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGCVFCKKLEPVATAKEDAGLEGDFRSYGAAD--HYGPDPTKARPASSF-AHIPNYSNFSSQAIN 62
            |||..||:.:...........:. |....|::  .|.||||       | :.|||:::||:....
Zfish     1 MGCACCKQRKASKAVSNQNSCDA-FNGTQASEPSRYIPDPT-------FNSGIPNFNDFSNPLTP 57

Human    63 P-GFLDSGTIRGVSGIGVTLFIALYDYEARTEDDLTFTKGEKFHILNNTEGDWWEARSLSSGKTG 126
            | ..::.....|::|.|||||||||:|:|||||||:|.|||||||:|||||||||||||.:||:|
Zfish    58 PTSIINPARPPGLTGGGVTLFIALYEYDARTEDDLSFQKGEKFHIINNTEGDWWEARSLDTGKSG 122

Human   127 CIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTR 191
            .|||||||||||||||||||||:||||||||||:..||:|.|||||||||||||||||||||..:
Zfish   123 YIPSNYVAPVDSIQAEEWYFGKMGRKDAERQLLAQNNPRGTFLIRESETTKGAYSLSIRDWDDAK 187

Human   192 GDHVKHYKIRKLDMGGYYITTRVQFNSVQELVQHYMEVNDGLCNLLIAPCTIMKPQTLGLA---K 253
            |||||||||||||.||||||||.||::||:||:||.|...|||..||..|....|:...|:   |
Zfish   188 GDHVKHYKIRKLDNGGYYITTRTQFDTVQQLVEHYTERAAGLCCRLIGSCRRGMPKLADLSVKTK 252

Human   254 DAWEISRSSITLERRLGTGCFGDVWLGTWNGSTKVAVKTLKPGTMSPKAFLEEAQVMKLLRHDKL 318
            |.|||.|.|:.|.::||.|.||:||:|.|||:|||||||||||||||:|||:|||:||.||||||
Zfish   253 DVWEIPRESLQLIKKLGNGQFGEVWMGMWNGTTKVAVKTLKPGTMSPEAFLDEAQIMKRLRHDKL 317

Human   319 VQLYAVVSEEPIYIVTEFMCHGSLLDFLKNPEGQDLRLPQLVDMAAQVAEGMAYMERMNYIHRDL 383
            ||||||||||||||:||||..||||||||:.:|::|:||||||||||:|.||||:||||||||||
Zfish   318 VQLYAVVSEEPIYIITEFMSQGSLLDFLKDGDGRNLKLPQLVDMAAQIAAGMAYIERMNYIHRDL 382

Human   384 RAANILVGERLACKIADFGLARLIKDDEYNPCQGSKFPIKWTAPEAALFGRFTIKSDVWSFGILL 448
            ||||||||:.|.||||||||||||:|:||...||:|||||||||||||:|:||||||||||||||
Zfish   383 RAANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILL 447

Human   449 TELITKGRIPYPGMNKREVLEQVEQGYHMPCPPGCPASLYEAMEQTWRLDPEERPTFEYLQSFLE 513
            ||||||||:||||||.||||||||:||.||||.|.||||:|.|.|.||.||:||.||||||||||
Zfish   448 TELITKGRVPYPGMNNREVLEQVERGYRMPCPQGSPASLHELMLQCWRKDPDERHTFEYLQSFLE 512

Human   514 DYFTSAEPQYQPGD 527
            ||||:.|||||||:
Zfish   513 DYFTATEPQYQPGE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FGRNP_001036194.1 SH3 80..137 CDD:327375 47/56 (84%)
SH2_Src_Fgr 140..240 CDD:198230 78/99 (79%)
PKc_like 267..514 CDD:328722 198/246 (80%)
yrkNP_001352482.1 SH3 76..133 CDD:327375 47/56 (84%)
SH2 136..234 CDD:326550 76/97 (78%)
PTKc_Src_Fyn_like 266..513 CDD:271105 198/246 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194330711
Domainoid 1 1.000 90 1.000 Domainoid score I27943
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3842
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52589
OrthoDB 1 1.010 - - D133886at7742
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100661
Panther 1 1.100 - - LDO PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.860

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