DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zfp1 and CG4730

DIOPT Version :9

Sequence 1:NP_001032754.1 Gene:Zfp1 / 22640 MGIID:99154 Length:403 Species:Mus musculus
Sequence 2:NP_001262965.1 Gene:CG4730 / 43099 FlyBaseID:FBgn0039355 Length:392 Species:Drosophila melanogaster


Alignment Length:350 Identity:90/350 - (25%)
Similarity:136/350 - (38%) Gaps:88/350 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse    91 TLNTDFVSLR---QVPYKYDLYEKTLKYNSDLLSSRNCVRKKGDGCGGFGEPLLYLKQEKPHAGL 152
            |||  |...|   :.|.|...:|.:|..::..|...||.|             |.|::..|:..|
  Fly    11 TLN--FTIARRTAEAPVKLVSHEVSLSDSTTSLELSNCCR-------------LCLEEPYPNQML 60

Mouse   153 EYSEYNGNGRALSHKD-------------------------------AIFKHRKI----KSLVQP 182
            :.:.......|||:.|                               |...|:|:    :.|.:.
  Fly    61 DMTVIYDQEAALSYYDCYEICTKEDLRQNPKNEPRTLCKRCAVELKWAYDFHKKMAIANQQLREI 125

Mouse   183 FVC---------------NYCDKTFSFKSLLVSHKR--------------IHTGEKPYECDVCQK 218
            ||.               |..|....|....:..|:              .|||:.  .|..|.|
  Fly   126 FVATEANTEQEDDVEDEENEADMNEEFLMEEIEEKQETPIDSLEDIVPRNRHTGKS--NCKFCHK 188

Mouse   219 TFSHKANLIKHQRIHTGEKP-FECPECGKAFTHQSNLIVHQRAHMEKKPYGCSECGKTFAQKFEL 282
            .|.:.:.:.|||.||...:| |.|.:|.:.:..:..|.||..:...:....|..|||.||....|
  Fly   189 EFRNHSRMAKHQMIHLANRPNFRCSQCDRVYLTKQALKVHVDSKHRQSGVHCDTCGKVFAIAKAL 253

Mouse   283 TTHQRIHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRYECS--ECGKSFIQNSQLIIHRRTH 345
            ..|:|.|..:.||.|:.|.:.|.::|:|.:||::.....|:.|.  .|.|||..:|.|..|..||
  Fly   254 EIHKRYHNRDFPYSCDLCDRRFAQRSHLTVHQQVKHSGSRFICEFPGCQKSFTSSSSLRNHECTH 318

Mouse   346 TGEKPYECTECGKTFSQRSTLRLHL 370
            |. .|:||..|.:::..|:.||:||
  Fly   319 TA-MPFECAHCHQSYPARNKLRMHL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zfp1NP_001032754.1 KRAB 7..47 CDD:366587
C2H2 Zn finger 161..177 CDD:275368 7/50 (14%)
COG5048 <175..336 CDD:227381 52/196 (27%)
C2H2 Zn finger 185..205 CDD:275368 4/48 (8%)
C2H2 Zn finger 213..233 CDD:275368 7/19 (37%)
C2H2 Zn finger 241..261 CDD:275368 5/19 (26%)
C2H2 Zn finger 269..289 CDD:275368 9/19 (47%)
C2H2 Zn finger 297..317 CDD:275368 7/19 (37%)
C2H2 Zn finger 325..345 CDD:275368 8/21 (38%)
zf-H2C2_2 341..362 CDD:372612 8/20 (40%)
C2H2 Zn finger 353..373 CDD:275368 6/17 (35%)
zf-H2C2_2 366..390 CDD:372612 3/4 (75%)
C2H2 Zn finger 381..401 CDD:275368
CG4730NP_001262965.1 zf-AD 46..124 CDD:285071 14/90 (16%)
C2H2 Zn finger 183..203 CDD:275368 7/19 (37%)
C2H2 Zn finger 212..232 CDD:275368 5/19 (26%)
C2H2 Zn finger 240..260 CDD:275368 9/19 (47%)
C2H2 Zn finger 268..289 CDD:275368 7/20 (35%)
C2H2 Zn finger 296..318 CDD:275368 8/21 (38%)
C2H2 Zn finger 325..346 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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