DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Map3k19 and Pak3

DIOPT Version :9

Sequence 1:NP_035867.2 Gene:Map3k19 / 22625 MGIID:1203481 Length:1515 Species:Mus musculus
Sequence 2:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster


Alignment Length:540 Identity:138/540 - (25%)
Similarity:222/540 - (41%) Gaps:114/540 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse  1001 IVEEIFTEECADEEGILNDDSLTQSLGDLKEPEGLHPQAPLVPSENSWAVLSEKRSGKRVSPEKH 1065
            |.|::..||..:.|..:|..:..:|    ::||......      :|.|..:|..||...|....
  Fly    91 ITEDVIHEESKEIENYVNYKNKHKS----QDPEKSDDDG------SSTATETESSSGCGSSAGNS 145

Mouse  1066 NVEPLDKINAEQMFPGYLEFDSLSEKSKTLVSFSSCSFQENLERAPS-----PTEQHWARSLEQD 1125
            |...::..:.:...|    .|:|.|..|.|.  ::...:|.|:.||.     |.::.......:.
  Fly   146 NSSSINDSSQQSTVP----LDALEEVFKELK--TNLEHRETLKAAPQEPPPVPPKKSPHTIPPKP 204

Mouse  1126 SLENNSTTYQTFGKISQEILDPGKNEELTDELLGCLVEELLALDEKDNNSCQIMTNEADAK---- 1186
            .::......|.|.:.|.                       :..||..:|..:|.|:....|    
  Fly   205 QIKPKPRVTQKFSRTSD-----------------------IRRDEDSDNQHKINTDTIIIKPAVG 246

Mouse  1187 --------NLNLVFSRRGNTIEELGRETTD----VKLQRCINGFRIYDE--ENFLTSNEKKTLSD 1237
                    |.:....||.   :|...:.||    |:|:...|.    |:  |.:.|:.|      
  Fly   247 AQDAGADDNPDETILRRS---KEKRAQKTDAEIYVELRAICNS----DDPRERYKTTQE------ 298

Mouse  1238 KSLNHEEAIFWTKGEILGRGAYGTVYCGLTSLGQLIAVKQVALDTSD-KLATEKEYRKLQEEVDL 1301
                            :|:||.|.|:..    ..|....|||:.|.| |..:.|:.  :..|:.:
  Fly   299 ----------------VGKGASGIVFIA----ADLQNESQVAVKTIDMKNQSSKDL--ILTEIRV 341

Mouse  1302 LKALKHVNIVAYLGTCL--EENTLSIFMEFVPGGSISSIINRFGPLPEMVFCKYTRQILQGVAYL 1364
            ||...|.|:|.:|...|  .|:.|.:.||::.||.::.::.........:.| ..|:.|..:::|
  Fly   342 LKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTETVMKERQIAC-VCRETLYAISFL 405

Mouse  1365 HDNCVVHRDIKGNNVMLMPTGIIKLIDFG-CAKRLAWAGLNGTHSDMLKSMRGTPYWMAPEVINE 1428
            |...::|||||.:||:|...|.:|:.||| ||        |....:..::|.||||||||||:..
  Fly   406 HAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCA--------NIEGDEKRQTMVGTPYWMAPEVVTR 462

Mouse  1429 SGYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPA--RFSEPAADFVRLC 1491
            ..||:|.||||||....||..|:||......:.|::.|.|:.  .|.:.:  :.|....||:..|
  Fly   463 KKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANG--RPDIKSWDKLSPNLQDFLDRC 525

Mouse  1492 LTRDQHERPSALQLLKHSFL 1511
            |..:...|.:|.:||.|.||
  Fly   526 LQVEVDRRATADELLSHPFL 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Map3k19NP_035867.2 ANK repeat 44..74 CDD:293786
ANK repeat 76..133 CDD:293786
ANK repeat 135..179 CDD:293786
STKc_YSK4 1246..1511 CDD:270801 87/270 (32%)
Pak3NP_001262638.1 PBD 19..73 CDD:279166
PKc_like 288..545 CDD:304357 90/295 (31%)
S_TKc 293..545 CDD:214567 89/290 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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